Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 >seq13 Length=1039764 Score = 107 bits (118), Expect = 2e-18 Identities = 209/309 (68%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 153732 GGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 153791 || || ||||| ||| ||||| | || ||| |||||| |||||| | || |||||| Sbjct 323416 GGAGAATGGGGCGCTGACATTGCGTTCGGAAGTGCGCAAAGATTTGGTGTGCCGATGGGA 323475 Query 153792 TATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 153851 | ||||| || ||||| || || || || ||| ||| | ||||||||||| || Sbjct 323476 TTCGGAGGACCACATGCCGCCTTTTTCGCCGTCCAAGAGAAGCACAAGAGAAAGATGCCC 323535 Query 153852 GGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTA 153911 || || | || || | ||| ||| | |||| ||| || ||| || |||| ||| Sbjct 323536 GGACGATTGGTTGGCCTGTCTAAGGATCGACTAGGTGGTAAGGCGTACCGACTAGCTCTA 323595 Query 153912 CAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAG 153971 || || | || || || || | ||||| || ||||| |||||| |||| || | || Sbjct 323596 CAAACACGGGAACAACACATTCGCAGAGAGAAGGCAACTAGTAACGTCTGTACGTCGCAA 323655 Query 153972 GCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACTACAT 154031 ||| || |||| || ||| | | |||||| || |||||| | || || || | Sbjct 323656 GCATTGTTGGCGAACATGAACGCCCTTTATGCAATCTACCATGGTCCCGAAGGTCTCAAA 323715 Query 154032 GCTATAGCA 154040 || || ||| Sbjct 323716 GCGATCGCA 323724 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 153210 GGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAAT 153269 || ||||||||||| |||||| || || | ||||| || ||||| || || ||||| Sbjct 322864 GGCCAAGGATACTACGGAACCCACACTCCAGCCGTCATCCAACGAAATGTACTCGAGAAC 322923 Query 153270 CCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAA 153329 || ||||||||| ||||| || || ||| | || || ||| || | |||||| Sbjct 322924 CCGGCTTGGTACACGAGCTACACCCCTTACCAACCAGAAATTAGTCAAGGTCGTTTGGAA 322983 Query 153330 GCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCA 153389 | || |||| | || || | | ||||| ||||| | | || ||||| || || Sbjct 322984 TCCTTGCTCAACTTTCAGACTATGGTTACAGACCTTACTGCGCTGCCCATAGCCAATGCC 323043 Query 153390 TCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 ||| ||||||||| ||||| || || ||||| ||| Sbjct 323044 AGTCTTCTAGATGAAGGTACTGCTGCTGCCGAAGCCATG 323082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210714833920