Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq13 120 4e-22 >seq13 Length=1039764 Score = 120 bits (132), Expect = 4e-22 Identities = 212/309 (69%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 158407 GGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 158466 || || ||||| ||||||||| | || ||| |||||| |||||| | || |||||| Sbjct 323416 GGAGAATGGGGCGCTGACATTGCGTTCGGAAGTGCGCAAAGATTTGGTGTGCCGATGGGA 323475 Query 158467 TACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 158526 | |||||| || ||||| || || || || ||| ||| | ||||||||||| || Sbjct 323476 TTCGGAGGACCACATGCCGCCTTTTTCGCCGTCCAAGAGAAGCACAAGAGAAAGATGCCC 323535 Query 158527 GGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTA 158586 || || | || || | ||| ||| | |||| ||| || ||| || |||| ||| Sbjct 323536 GGACGATTGGTTGGCCTGTCTAAGGATCGACTAGGTGGTAAGGCGTACCGACTAGCTCTA 323595 Query 158587 CAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAA 158646 || || | || || || || | ||||| || ||||| |||||| |||| || | ||| Sbjct 323596 CAAACACGGGAACAACACATTCGCAGAGAGAAGGCAACTAGTAACGTCTGTACGTCGCAA 323655 Query 158647 GCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACTACAT 158706 ||| || |||| || ||| | | |||||| || |||||| | || || || | Sbjct 323656 GCATTGTTGGCGAACATGAACGCCCTTTATGCAATCTACCATGGTCCCGAAGGTCTCAAA 323715 Query 158707 GCTATAGCA 158715 || || ||| Sbjct 323716 GCGATCGCA 323724 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 157885 GGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAAT 157944 || ||||||||||| |||||| ||| || | ||||| || ||||| || || ||||| Sbjct 322864 GGCCAAGGATACTACGGAACCCACACTCCAGCCGTCATCCAACGAAATGTACTCGAGAAC 322923 Query 157945 CCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAA 158004 || ||||||||| ||||| || || ||| | || || ||| || | |||||| Sbjct 322924 CCGGCTTGGTACACGAGCTACACCCCTTACCAACCAGAAATTAGTCAAGGTCGTTTGGAA 322983 Query 158005 GCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCA 158064 | || |||| | || || | | ||||| || || | || || ||||| || || Sbjct 322984 TCCTTGCTCAACTTTCAGACTATGGTTACAGACCTTACTGCGCTGCCCATAGCCAATGCC 323043 Query 158065 TCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 ||| ||||||||| ||||| || || ||||| ||| Sbjct 323044 AGTCTTCTAGATGAAGGTACTGCTGCTGCCGAAGCCATG 323082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588049083015680