Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq14 172 1e-37 >seq14 Length=1021207 Score = 172 bits (190), Expect = 1e-37 Identities = 164/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| || |||||||| || || || ||||||||| | || | |||||||| Sbjct 858824 AACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGCTTAAGGTGCGACCATCTTC 858883 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||||| |||||||| || ||||| || || |||||||||||||| ||||| || Sbjct 858884 CAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTG 858943 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||| || |||||||| ||| ||| ||||| ||||||| ||||| Sbjct 858944 AATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAGGGTAATAGTCTT 859003 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| ||||| || || ||||| | ||||| Sbjct 859004 TCCCGTCAATGTCTTGACGAAAATCTGCAT 859033 Score = 172 bits (190), Expect = 1e-37 Identities = 169/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | ||||||||| ||||| ||||| || ||||||||||| ||| || |||| Sbjct 859044 AGTCTGAGAACAAGGTGCAGAGTTGACTCCTTCTGAATATTGTAGTCGCTCAGTGTTCGG 859103 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || | ||||||||| || |||||||||||||||||||| || || || ||||| Sbjct 859104 CCATCCTCCAACTGCTTACCCGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCTTCC 859163 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || |||||||| || || ||||||||| ||||| ||||| || Sbjct 859164 TTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCAAGAGTG 859223 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||| || || | || || ||||| | |||||| Sbjct 859224 ATCGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 859261 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||| ||| || ||||| ||||| |||| |||||| | || || ||| Sbjct 859572 ACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCG 859631 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || | ||| |||||||| |||||||| || || ||||| || Sbjct 859632 AGCTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGG 859691 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||| ||||| ||| || ||||| || | ||||| Sbjct 859692 ATCTTCGACTTGACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTG 859751 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | ||||| Sbjct 859752 CCAGTGAGAGTCTTGACGAAGATCTGCAT 859780 Score = 129 bits (142), Expect = 1e-24 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| || || || || || ||||| |||| || |||| ||||| || Sbjct 859281 ACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCA 859340 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || | ||| || ||||| ||||||||||| || |||||||| Sbjct 859341 AGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCTTGG 859400 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || |||||||| || || || ||||| || | |||||| Sbjct 859401 ATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTT 859460 Query 195112 CCTGTCAAAGTTTTTACGA 195130 || || | || || |||| Sbjct 859461 CCGGTAAGGGTCTTGACGA 859479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109477506012896