Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 1e-12 >seq7 Length=1567828 Score = 87.8 bits (96), Expect = 1e-12 Identities = 249/380 (66%), Gaps = 2/380 (1%) Strand=Plus/Minus Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067 |||||||||| || || |||| || ||| || |||||||| ||| | | ||| | Sbjct 114686 TGTGGCACGGCGGGAGCACCATCTTCTTCAGGTCCTTCGGGTTCCACGCGGAAAGGATCA 114627 Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCC 30127 |||| | || | |||||||||| | || | | ||| |||||| || | Sbjct 114626 TGCGGCGATCGTACGGGTTGTTCCGCAGCTTGTGTATGACGTCGGCCAGCTGGTCGTAAC 114567 Query 30128 CCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGA 30187 || || | |||||||| | || || ||||| || ||||| || | |||||||| Sbjct 114566 CCTGGCCGGTGTAGTCTGTCTTCGCATCGACATACTCAGCGCCGAAGTGGCGCCACTGGA 114507 Query 30188 ACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAA 30247 | ||||| || || |||||||| || | || | | | | ||| ||||| | | Sbjct 114506 AGCCGTAAACGGGACCCAGGTCGCCGACCTCGCGTTCCGTCAGTCCCAAGTTGTCGAGGA 114447 Query 30248 AGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGT 30307 | || | ||| || ||| ||||||||||||| || ||| ||| || | ||| Sbjct 114446 ACTCGCGGGATCCATTGCCGTCCCAGATCTTGACATCCTGTTCGCTAAGAGATGAGGACG 114387 Query 30308 TTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 30366 ||| ||||| || |||||| || ||||| | | |||||| ||||| | | Sbjct 114386 AGGTGTTTCCCTC-GATGAACCAGAGTAGCTCGGCAATGACGGCGCGTAGGAAGACGCGC 114328 Query 30367 TTGGTCGTGAGGAGGGGAAA 30386 || ||||| |||||||| || Sbjct 114327 TTCGTCGTTAGGAGGGGTAA 114308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616165752224