Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq51 205 2e-47 seq15 154 3e-32 >seq51 Length=278824 Score = 205 bits (226), Expect = 2e-47 Identities = 810/1250 (65%), Gaps = 61/1250 (5%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 |||| ||| || |||||||| ||||| |||||| |||||| | | | ||||| || Sbjct 148940 GTCAAGGCGGCATGGTAGATCGTCTCGAAGATCTGCTTGTTCAATTGTCTAGCCTCTGGC 148999 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 || ||||||||||||| | || ||| || || ||||| || || | || Sbjct 149000 GACTCAAAGGGCATACGCAATGCCAAGAATGTGTCAGCAAGACCCTGAACACCAAGGCCA 149059 Query 221537 ATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGT 221594 ||||| | ||||| | ||||| | |||| || ||||| ||||| ||| | ||||| | Sbjct 149060 ATGGGACGGTGTCGCATGTTGCTGTTGCGG--GCCTCTGGGACGGGGTAATAATTGACAT 149117 Query 221595 CGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGAT 221654 | || | |||| | || || || ||||| ||||| || ||||||| | Sbjct 149118 CAATGATTCTGTTCAAATTGTGAACGACGACTTGGGTAACCTCATGCAACTTCTGGAAGT 149177 Query 221655 TGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGG 221714 || || | ||| |||| | || || || | |||||||||| | Sbjct 149178 ----CAT-AAGT----GCCTTCGTTATAG---TCAACGAAGG-----AGGGCAACGCGAG 149220 Query 221715 -----CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACA 221769 | | ||| || || |||||||| || | || |||| |||||||| || || Sbjct 149221 GGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCGATGATCTCGGTGCA 149280 Query 221770 GAGGTT---GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGC 221826 || || ||||| || || || || | || |||||| |||||| ||| ||| Sbjct 149281 AAGATTCGAGCTGCGA---ATAGTACCAAGATTCTTCTGATTACTCTTGCGGTTG-CAGT 149336 Query 221827 G-TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCC 221885 | |||||||| ||||| |||||| |||||||| ||||||| | ||||| || || Sbjct 149337 GATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACC 149396 Query 221886 AGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATAC--CCGG 221942 | || | |||| || | | || | | || |||||| | ||| ||| | | Sbjct 149397 ACAGCT-TCTGAGCCTTAATCTTCTGGCGGCCGCGACCCTCTGC---TTCGTACTTCTCG 149452 Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002 || || || | | |||| || || || | || | || || || || | |||| Sbjct 149453 TACAGGGCCT--CGAACTCATCGCCATAAACGTCAGCTAGACCAGGGCATTCGTTAGGAC 149510 Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062 |||| || |||| | || | | || | || ||||||||| || |||||||| | Sbjct 149511 ACATGAGGGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCTGGGATCCAGA 149570 Query 222063 GCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122 | ||| | |||||||| | || || |||||| ||| | ||| || | ||||| | Sbjct 149571 GAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAA 149630 Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 |||||||||| || | |||||| ||||| ||||||| ||| | ||| || |||| || Sbjct 149631 GGAACTCAAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCGAAAGCACCAGGTCTCT 149690 Query 222183 TGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACC 222241 |||||||||||||||| || || | ||| | ||||||| || || | ||||| Sbjct 149691 TGTTGCCACCCTGATCTACGTATCT-TGCAGTGTTATTGAAGACACGTAGCATGGGTACA 149749 Query 222242 AGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTTA 222298 | ||||| || ||||| ||||| |||||| | || || | | ||| | Sbjct 149750 ATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCGGTGA 149809 Query 222299 CTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTG 222358 | | || | || ||||||||||| || ||||||||||| ||| ||||||| ||| Sbjct 149810 AT-GTTGAGA--CCAATACCACCGGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTG 149866 Query 222359 TCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGA 222418 || ||| ||||| || ||| || || | || | || || |||||||| | ||| Sbjct 149867 TCATAGATACCCTCAATGCTGTCGTCTTTCATGTCGACGAGGAAGCAAGACGAGAGCTGG 149926 Query 222419 GATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478 | | || | | || || || || || || || || || ||||| |||||| Sbjct 149927 GCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAGAC 149986 Query 222479 ATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCA 222537 || || | ||| |||| | |||| | | | | || ||| || | | | | || Sbjct 149987 ATGAGGTTGTAGGTCTGAATGACTTTCTCAACATCATCACCCCAGATGCCGACAGCCACA 150046 Query 222538 TCTCATGTACATGTACTGGGGCCTCTCCACAGGACC----CTTGGAGCTGGAGAGCAGGT 222593 | |||| ||||| ||| || ||||| ||| | | | | ||||| || |||| Sbjct 150047 -CGCATGATCATGTGCTGTGGTCTCTCTACA--ATCTTGTCGTCGAGCT--TCAGTAGGT 150101 Query 222594 ACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTG 222643 | ||| |||||||||||||| || ||||| | | || || |||||| Sbjct 150102 AAGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAATCTCTG 150151 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | ||| || | | ||| | ||| |||||| | || Sbjct 148648 GTTAACGACCTGGAACTCGCCAGCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGG 148707 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||| ||||| ||||||||||| | |||||||| |||||||| || || || Sbjct 148708 CTCGAAGCACTCATTGTTACCCAGGATCTGGGATGTGCTGGCTGTGGGCATAGGGGCGAC 148767 Query 221236 CAGCAGACTGTTGCGCA 221252 || || |||||||||| Sbjct 148768 CAACAAGCTGTTGCGCA 148784 >seq15 Length=993015 Score = 154 bits (170), Expect = 3e-32 Identities = 555/861 (64%), Gaps = 32/861 (4%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACT-CAAACTGGACCGCCGAAGAGATTGATCT 25535 || ||| |||||||||||||| | | || || | |||||| ||||| ||||||||||| Sbjct 220336 ATCTGGCAGATGTACAAGAAG-CACGAAGCTTCCTTCTGGACTGCCGAGGAGATTGATCT 220278 Query 25536 GGCCAAGGACATGGACGGCTGGT---ACGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| | ||| ||| || ||| || ||||| || | || ||| Sbjct 220277 ATCCAAGGATCTCCACGATTGGAGCAACCGCCTA---AATGACGACGAGAAGTTCTTCAT 220221 Query 25593 GT---ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA 25649 | || | | || ||||| || || || || || || || ||||| || || ||| Sbjct 220220 CTCCCACATTCTCGCCTTCTTCGCCGCATCCGACGGCATTGTCAACGAAAACCTTGTCGA 220161 Query 25650 GAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 | |||| | | || || ||| | |||||| || |||||||| |||||||| Sbjct 220160 GCGATTTTCTGGTGAGGTTCAGATCCCAGAGGCCCGATGCTTCTACGGCTTCCAGATCAT 220101 Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA 25766 || || || | ||||| ||| ||| | || || || || ||||| | || Sbjct 220100 GATGGAGAACATCCACTCCGAGACGTACTCT---CTCCTCATTGACACCTACATCAAGGA 220044 Query 25767 CGTCGCCGAGAGAGAT-CGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825 ||| ||| ||| | || || ||| || ||| ||| || ||||| | || Sbjct 220043 GCCTGCCCAGA-AGACACATCTCTTCAATGCTATTGAGACCATTCCTTGCATCCGCAAGA 219985 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGG 25885 |||| ||||| || | ||||| | | ||| | || || | | |||| || Sbjct 219984 AGGCCGACTGGGCTCTGCACTGGATTGCCGACAAGAAGTCCACCTTCGCCCAGCGTCTTA 219925 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | ||||| || || || ||||| ||||| |||||||| | || || |||||||||||| Sbjct 219924 TTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCAGCGGAGCCTTCGCTTCCATCTTCTGGC 219865 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 ||||| || || |||||||| ||| ||| |||||||| ||||| | |||| Sbjct 219864 TCAAGAAGCGTGGTCTTATGCCCGGTCTGACCTTCTCCAACGAACTCATTTCGCGTGACG 219805 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTT 26065 ||||||| |||| || || ||||||||||| | | | |||| ||| |||| | | Sbjct 219804 AGGGTCTGCACACCGACTTCGCCTGCCTGCTGTTCTC---CCAC---CTCAACAACCGTC 219751 Query 26066 C--TCAAGAGAC--CGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTT 26121 | |||| ||| ||| | | ||||||| || || || || ||| ||||||| Sbjct 219750 CCGGCAAG-GACGTGGTCGAGAAGATCATCACCGATGCCGTCACCATTGAGCAGGAGTTC 219692 Query 26122 CNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATAC 26181 | | ||||||||| || ||||||| || ||| Sbjct 219691 CTGACGGAGGCTTTGCCCTGCGCCCTACTAGGCATGAACGCCAACCTCATGAAGCAGTAC 219632 Query 26182 ATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTAC 26240 || |||| || ||||||| ||||| ||| | || || | | | ||| | | Sbjct 219631 ATCGAGTTCGTCGCCGACCGCCTGCTGGTGGC-CCTCGGCAATGAGAAGGTGTACCGCTC 219573 Query 26241 GCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 | ||||| |||||||||||||| ||||| || ||| || |||||||||||||| || Sbjct 219572 CACCAACCCCTTCGACTTTATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGA 219513 Query 26301 AAAGAGGGTCGGCGACTATCA 26321 ||| | || || || || || Sbjct 219512 GAAGCGCGTTGGTGATTACCA 219492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928841456158720