Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq51 105 3e-18 >seq51 Length=278824 Score = 105 bits (116), Expect = 3e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| || |||| | |||||| || ||| || | |||||| ||||| | || || Sbjct 149521 CCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCTGGGATCCAGAGAGCCAGGAA 149580 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | ||| | || | | ||| || || || || |||||| ||||| | ||| ||||| Sbjct 149581 GAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTCAAA 149640 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 || ||| |||||||| || || | |||||| || ||| ||| ||| || ||||| Sbjct 149641 AACATCCGAGTGCCAAGGCTCGAGATAGATGGCGAAAGCACCAGGTCTCTTGTTGCCACC 149700 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAAC 26118 |||||||||||||||||||| | |||||| || Sbjct 149701 CTGATCTACGTATCTTGCAGTGTTATTGAAGAC 149733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039111829600