Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11]
288 sequences; 47,717,833 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq13 107 2e-18
>seq13
Length=1039764
Score = 107 bits (118), Expect = 2e-18
Identities = 209/309 (68%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 139247 TGCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGC 139306
||| || || | || || || | |||||| || |||||| | | ||| || ||
Sbjct 323724 TGCGATCGCTTTGAGACCTTCGGGACCATGGTAGATTGCATAAAGGGCGTTCATGTTCGC 323665
Query 139307 GAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTC 139366
| || |||||| | || |||| |||||| ||||| || ||||| | ||| || || ||
Sbjct 323664 CAACAATGCTTGCGACGTACAGACGTTACTAGTTGCCTTCTCTCTGCGAATGTGTTGTTC 323605
Query 139367 TCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTAC 139426
| |||||||| |||| || ||| || | ||| | ||| ||| | || ||
Sbjct 323604 CCGTGTTTGTAGAGCTAGTCGGTACGCCTTACCACCTAGTCGATCCTTAGACAGGCCAAC 323545
Query 139427 AATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGG 139486
| || || || ||||||||||| | ||| ||| || || || || ||||| ||
Sbjct 323544 CAATCGTCCGGGCATCTTTCTCTTGTGCTTCTCTTGGACGGCGAAAAAGGCGGCATGTGG 323485
Query 139487 ACCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCC 139546
|||||| ||||||| || | |||||| |||||| ||| || | ||||| ||| ||
Sbjct 323484 TCCTCCGAATCCCATCGGCACACCAAATCTTTGCGCACTTCCGAACGCAATGTCAGCGCC 323425
Query 139547 CCACTCACC 139555
||| || ||
Sbjct 323424 CCATTCTCC 323416
Score = 84.2 bits (92), Expect = 3e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| || || || || ||||| ||||||||| ||| || || ||||| || | |
Sbjct 323082 CATGGCTTCGGCAGCAGCAGTACCTTCATCTAGAAGACTGGCATTGGCTATGGGCAGCGC 323023
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
||||| ||||| | | || || | |||| || | |||||| | || ||| ||
Sbjct 323022 AGTAAGGTCTGTAACCATAGTCTGAAAGTTGAGCAAGGATTCCAAACGACCTTGACTAAT 322963
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
|| | ||| || || ||||| ||||||||| || ||||| || || ||||| ||
Sbjct 322962 TTCTGGTTGGTAAGGGGTGTAGCTCGTGTACCAAGCCGGGTTCTCGAGTACATTTCGTTG 322903
Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACC 140077
||||| | || || |||||| ||||||||||| ||
Sbjct 322902 GATGACGGCTGGAGTGTGGGTTCCGTAGTATCCTTGGCC 322864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578996315605760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |