Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 >seq13 Length=1039764 Score = 107 bits (118), Expect = 2e-18 Identities = 209/309 (68%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 139247 TGCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGC 139306 ||| || || | || || || | |||||| || |||||| | | ||| || || Sbjct 323724 TGCGATCGCTTTGAGACCTTCGGGACCATGGTAGATTGCATAAAGGGCGTTCATGTTCGC 323665 Query 139307 GAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTC 139366 | || |||||| | || |||| |||||| ||||| || ||||| | ||| || || || Sbjct 323664 CAACAATGCTTGCGACGTACAGACGTTACTAGTTGCCTTCTCTCTGCGAATGTGTTGTTC 323605 Query 139367 TCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTAC 139426 | |||||||| |||| || ||| || | ||| | ||| ||| | || || Sbjct 323604 CCGTGTTTGTAGAGCTAGTCGGTACGCCTTACCACCTAGTCGATCCTTAGACAGGCCAAC 323545 Query 139427 AATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGG 139486 | || || || ||||||||||| | ||| ||| || || || || ||||| || Sbjct 323544 CAATCGTCCGGGCATCTTTCTCTTGTGCTTCTCTTGGACGGCGAAAAAGGCGGCATGTGG 323485 Query 139487 ACCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCC 139546 |||||| ||||||| || | |||||| |||||| ||| || | ||||| ||| || Sbjct 323484 TCCTCCGAATCCCATCGGCACACCAAATCTTTGCGCACTTCCGAACGCAATGTCAGCGCC 323425 Query 139547 CCACTCACC 139555 ||| || || Sbjct 323424 CCATTCTCC 323416 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || || || ||||| ||||||||| ||| || || ||||| || | | Sbjct 323082 CATGGCTTCGGCAGCAGCAGTACCTTCATCTAGAAGACTGGCATTGGCTATGGGCAGCGC 323023 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||||| ||||| | | || || | |||| || | |||||| | || ||| || Sbjct 323022 AGTAAGGTCTGTAACCATAGTCTGAAAGTTGAGCAAGGATTCCAAACGACCTTGACTAAT 322963 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 || | ||| || || ||||| ||||||||| || ||||| || || ||||| || Sbjct 322962 TTCTGGTTGGTAAGGGGTGTAGCTCGTGTACCAAGCCGGGTTCTCGAGTACATTTCGTTG 322903 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACC 140077 ||||| | || || |||||| ||||||||||| || Sbjct 322902 GATGACGGCTGGAGTGTGGGTTCCGTAGTATCCTTGGCC 322864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996315605760