Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq51 196 6e-45 seq15 102 1e-16 seq5 98.7 1e-15 >seq51 Length=278824 Score = 196 bits (216), Expect = 6e-45 Identities = 1044/1639 (64%), Gaps = 49/1639 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| ||||||| || || |||||||| || || || |||| ||| Sbjct 150066 CCACAGCACATGATCATGCGTGTGGCTGTCGGCATCTGGGGTGATGATGTTGAGAAAGTC 150007 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | |||| ||| || ||||| ||| || |||| ||| || | ||||| |||| Sbjct 150006 ATTCAGACCTACAACCTCATGTCTAGCAAA-TAC-TTCACTCATGCTTCCCCAACTCTCT 149949 Query 75330 TCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 |||||||||| ||||| || || ||| | || ||||||||| ||| || || || Sbjct 149948 TCAATGCTGGAACACCCCAGGCC-CAGCTCTCGTCTTGCTTCCTCGTCGACATGAAAGAC 149890 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | |||||||||| || || | | ||||| ||||| ||| ||| Sbjct 149889 GACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCC 149830 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || |||||||| | |||| || | | || | | || ||| || || Sbjct 149829 GGTGGTATTGGTCTCAACATTCACCGCATCCGTGCTACTGGCTCATACATTGCTGGCACT 149770 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || || | || ||| | || ||||| || || || || ||| || | || Sbjct 149769 AACGGCACCTCGAACGGCATTGTACCCATGCTACGTGTCTTCAATAACACTGCAAGATAC 149710 Query 75569 GTAAATCAAGCGGGGCGTCGCAAGG---GGTCCAT-CGCGGTCTACTTGGAACCATGGCA 75624 ||| |||| | | ||| | || ||| | | ||| |||| | || || ||||| Sbjct 149709 GTAGATCAGG-GTGGCAACAAGAGACCTGGTGCTTTCGCCATCTATCTCGAGCCTTGGCA 149651 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 | ||| | | ||||||||||| | ||| ||||| || | || || | ||| Sbjct 149650 CTCGGATGTTTTTGAGTTCCTTGATCTTCGAAAGAACCATGGCAAGGAGGAAGTTCGTGC 149591 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | |||||||| | || ||||| ||||| || ||||||||||| |||||| || Sbjct 149590 CCGCGATCTCTTCCTGGCTCTCTGGATCCCAGATCTCTTCATGAAGCGTGTTGAGAAGAA 149531 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 ||| | ||| | || | ||||| || || || || ||||| | |||| || | Sbjct 149530 TGGAGAGTGGACCCTCATGTGTCCTAACGAATGC-CCTGGTCTAGCTGACGTTTATGGCG 149472 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 | ||||| || ||||| ||| ||||| |||| |||||| | | | || | | | Sbjct 149471 ATGAGTTCGAGGCCCTGTACGAGAAGTACGAAGCAGAGGGTCGCGGC----CGCCAGAAG 149416 Query 75864 C---AGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCA 75919 || | | || | | ||| | || |||||| | | ||||| |||||||||| || Sbjct 149415 ATTAAGGCTCAGAAGCTGTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGAAATCCC 149356 Query 75920 TATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATC 75979 | ||||||||||||||| || ||| |||||||| || |||||| | || || || Sbjct 149355 TTCATGCTTTACAAGGATCACTGCAACCGCAAGAGTAATCAGAAGAATCTTGGTACTATT 149296 Query 75980 AAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTT 76039 ||||| ||||||||||| || || | |||||| | | |||||| |||||| Sbjct 149295 CGCAGCTCGAATCTTTGCACCGAGATCATCGAGTACTCCGCCCCTGATGAGGTGGCTGTC 149236 Query 76040 TGCAATTTGGCATCAATCGC----CCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTT 76095 ||||| || || || |||| || ||| || || | || | || |||||| Sbjct 149235 TGCAACTTAGCTTCCCTCGCGTTGCCCTCCTTCGT-TGACTATAACGA---AGGCACTTA 149180 Query 76096 TGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCAT 76155 ||| | | || | ||||| | || | | || | ||| | ||| || |||| Sbjct 149179 TGACTTCCAGAAGTTGCATGAGGTTACCCAAGTCGTCGTTCACAATTTGAACAGAATCAT 149120 Query 76156 TGACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214 ||| |||| ||| ||||| ||| || || || || ||||||||| | || | Sbjct 149119 TGATGTCAATTATTACCCCGTCCCAGA-GGCCCGCAACAGCAACATGCGACACCGTCCCA 149061 Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACG-CATTTGAT 76273 |||| | |||||||| ||||| || || ||| | | || || | | ||||| Sbjct 149060 TTGGCCTTGGTGTTCAGGGTCTTGCTGACACATTCTTGGCATTGCG-TATGCCCTTTGAG 149002 Query 76274 TCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTG 76333 || || || | | |||| | ||||| || || || || || || || || Sbjct 149001 TCGCCAGAGGCTAGACAATTGAACAAGCAGATCTTCGAGACGATCTACCATGCCGCCTTG 148942 Query 76334 GAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393 ||| || | ||| | | |||| | || || | || ||||||||| Sbjct 148941 ACTGCGTCCATGGAGATTGCTAAGGTTGAAGGCCCTTACTCTACCTACGAAGGTTCTCCC 148882 Query 76394 GCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AGCTCAACTACG 76451 | || || || | ||||| | || |||| |||| || | ||| | || | | Sbjct 148881 GTCTCGCAGGGCATCCTTCAATACGACATGT-GGAATGTCACCCCATCGGATC-TTTGGG 148824 Query 76452 ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 76511 ||||| |||||||| | ||||| | || ||| | || ||||| | ||| | | Sbjct 148823 ACTGGACCAGCCTCAAGGAGCAAATCAAACAAAATGGTGTGCGCAACAGCTTGTTGGTCG 148764 Query 76512 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCAT 76571 | || ||||| |||||| ||| | || ||| ||||||| ||||| ||||| || || | Sbjct 148763 CCCCTATGCCCACAGCCAGCACATCCCAGATCCTGGGTAACAATGAGTGCTTCGAGCCTT 148704 Query 76572 ACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGC 76631 |||| | ||||||||| | | |||||| || ||||| | || || | Sbjct 148703 ACACTTCCAACATCTACTCTCGCCGTGTCCTCGCTGGCGAGTTCCAGGTCGTTAA----C 148648 Query 76632 ACCTCG----TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTC 76687 ||| | |||| ||||| | || ||||||||||| | |||||| | | Sbjct 148647 CCCTGGTTGCTCAAGGACCTTGTTGACATGGGTCTCTGGTCTGATAGCATGAAGAACCGT 148588 Query 76688 ATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAAT 76747 || | | ||| ||||| ||||| || ||| | | || || | |||||||||| | Sbjct 148587 ATCATTGCCGAGGGCGGTTCAATTCAGAACATCCCGAACATTCCTGCTGATATCAAGGCT 148528 Query 76748 CTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAGATGTCATTGACATGGCCGCAGATC 76805 || ||| || || ||||||| || | ||| ||| | | |||||||| || | Sbjct 148527 CTTTACAAGACCGTCTGGGAAATCTCCCAACGAA--CTGTTGTCCAGATGGCCGCTGACC 148470 Query 76806 GTGGTCGCTTCATTGATCA 76824 ||||| |||||||| || Sbjct 148469 GTGGTGCGTTCATTGACCA 148451 >seq15 Length=993015 Score = 102 bits (112), Expect = 1e-16 Identities = 143/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAA--AGTCTCGCTCCTTCGCCGAG 65079 |||||||| | ||||| || | ||| ||| | |||| |||| | |||||||| || Sbjct 219988 AAGAAGGCCGACTGGGCTCTGCACTGGATTGCCGACAAGAAGTC---CACCTTCGCCCAG 219932 Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATT 65139 || ||| |||| || || || ||||||||||||||| ||| | ||| | || Sbjct 219931 CGTCTTATTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCAGCGGAGCCTTCGCTTCCATC 219872 Query 65140 TATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCC 65199 | ||| | |||||||| ||||| ||||| || || |||||| || ||||| ||||| Sbjct 219871 TTCTGGCTCAAGAAGCGTGGTCTTATGCCCGGTCTGACCTTCTCCAACGAACTCATTTCG 219812 Query 65200 CGAGATGAGGGTCTCCAC 65217 || || |||||||| ||| Sbjct 219811 CGTGACGAGGGTCTGCAC 219794 >seq5 Length=1588943 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||| ||||| || || || || ||||||| || || || ||||| ||||| | Sbjct 1512932 TGGTGCGAAGATACCTCGCGGTGCGATTCTCGCTGGACCCCCTGGAACGGGTAAGACATT 1512873 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CA 175392 || || ||||| ||| || |||||| || |||||| | || | | || | || Sbjct 1512872 ACTTGCGAAAGCCACCGCTGGCGAATCAGGAGTACCATTCTTT-AGCG-TAAGCGGTTCA 1512815 Query 175393 AACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452 | || || |||||||| |||||||| ||||| | ||| | |||||||| | | Sbjct 1512814 GAATTCGTTGAGATGTTCGTTGGTGTTGGTGCGTCCCGAGTTAGGGATCTCTTCGCCACA 1512755 Query 175453 GCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 || || ||||| || ||||| |||||||||||||||||||||| Sbjct 1512754 GCGCGAAAAAATACGCCGTGTATCATCTTCATTGATGAGATTGATGC 1512708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567452349440