Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq51 131 2e-25 seq14 104 2e-17 >seq51 Length=278824 Score = 131 bits (144), Expect = 2e-25 Identities = 728/1151 (63%), Gaps = 42/1151 (4%) Strand=Plus/Plus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | |||||| || || || || | || || ||| ||| |||||| ||| |||| Sbjct 148648 GTTAACGACCTGGAACTCGCCAGCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGG 148707 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| || | || ||||| ||||| ||||| | ||| | || || ||||| || || Sbjct 148708 CTCGAAGCACTCATTGTTACCCAGGATCTGGGATGTGCTGGCTGTGGGCATAGGGGCGAC 148767 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 ||| | || || | ||| | | |||||| | |||||||| | ||||||||| Sbjct 148768 CAACAAGCTGTTGCGCACACCATTTTGTTTGATTTGCTCCTTGAGGCTGGTCCAGTCCCA 148827 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 | ||| || | |||||||| ||||| || | || ||| ||||| Sbjct 148828 AAGATCCGATGGGGTGACATTCCACATGTCGTATTGAAGGATGCCCTGCGAGACGGGAGA 148887 Query 138741 GCCTTCGTACGAATCGTATACACCA--AACTCTTGCGCCAACTCGTTGCTCGCC-TCGAG 138797 |||||||| | | ||| || ||| ||| || | ||| || ||| || || Sbjct 148888 ACCTTCGTAGGTAGAGTAAGGGCCTTCAAC-CTTA-GCAATCTCCATGGACGCAGTCAAG 148945 Query 138798 CGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC-GGCGCTCT 138856 || ||| ||| || || ||| ||||||| || | || ||||| |||| || Sbjct 148946 -GCGGCATGGTAGATCGTCTCGAAGATCTGCTTGTTCAATTGTCTAGCCTCTGGCGA-CT 149003 Query 138857 CGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAG 138916 | | ||||| || | | ||| | ||| || || || || || || | || | | Sbjct 149004 CAAAGGGCATACGCAATGCCAAGAATGTGTCAGCAAGACCCTGAACACCAAGGCCAATGG 149063 Query 138917 GGCGATGGCGCAGATTTGACGCTTTTGCGG----CTTCGATAGGATAATAGTTTACATCG 138972 | || || |||| || ||| |||||| || || || ||||| || ||||| Sbjct 149064 GACGGTGTCGCATGTT----GCTGTTGCGGGCCTCTGGGACGGGGTAATAATTGACATCA 149119 Query 138973 ATGATTTTGTTTAAATTTCGCACGACCACCTTAGT---CGTATGCTTTAATCGTTCAAAA 139029 |||||| |||| ||||| | ||||| || | || | |||| || | || Sbjct 149120 ATGATTCTGTTCAAATTGTGAACGACGACTTGGGTAACCTCATGC---AACTTCTGGAAG 149176 Query 139030 TCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCT 139089 || || ||||| |||| | ||| |||| | | || | | || ||| Sbjct 149177 TCATAAGTGCCTTCGTTATAGTCAACGAAGGAGGGCAACGCGAGG---------GAAGCT 149227 Query 139090 ATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTA 139149 | |||||| || ||||| || || ||| || ||| |||| || |||| || | ||| Sbjct 149228 AAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCGATGATCTCGGTGCAAAGATTC 149287 Query 139150 CTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAA 139209 | || ||||| | ||| | ||||| || || ||||| || ||| |||||| Sbjct 149288 GAGCTGCGAATAGTACCAAGATTCTTCTGATTACTCTTGCGGTTGCAGTGATCCTTGTAA 149347 Query 139210 AGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTA 139269 ||||| | || | ||||| || || | ||| | |||| | ||| | | | Sbjct 149348 AGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACAGCTTCTGA 149407 Query 139270 GCTTGTATTT---GACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCG 139326 || | || | | || || | || | |||||||| ||||| || | ||| Sbjct 149408 GCCTTAATCTTCTGGCGGCCGCGACCCTCTGCT---TCGTACTTCTCGTACAGGGCCTCG 149464 Query 139327 AATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCAT 139386 || || || || |||||| ||| | | || | || |||||||||||| | ||| Sbjct 149465 AACTCATCGCCATAAACGTCAGCTAGACCAGGGCATTCGTTAGGACACATGAGGGTCCAC 149524 Query 139387 ACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAA 139446 | || ||| || || ||| ||||||| ||||| || ||||| | ||| | | | | Sbjct 149525 TCTCCATTCTTCTCAACACGCTTCATGAAGAGATCTGGGATCCAGAGAGCCAGGAAGAGA 149584 Query 139447 TCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTT-AAGGAAATCAAAAAC 139505 ||||| || || ||| || ||| | | || | | | |||||| |||||||| Sbjct 149585 TCGCGGGCACGAACTTCCTCCTTGCC-ATGGTTCTTTCGAAGATCAAGGAACTCAAAAAC 149643 Query 139506 GTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCACCTTG 139562 || | |||||| || || ||||||||||| | || || | || |||||||| || Sbjct 149644 ATCCGAGTGCCAAGGCTCGAGATAGATGGCGAAAGCACCAGGTCTCTTGTTGCCACCCTG 149703 Query 139563 ATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGT 139622 ||| |||| || | ||| |||||||| || || | ||| || | | ||| ||| || Sbjct 149704 ATCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGGTACAATGCCGTTCGAGGT 149763 Query 139623 TCCGTTGGTGC 139633 ||||| |||| Sbjct 149764 GCCGTTAGTGC 149774 >seq14 Length=1021207 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || ||||| || || || || || || || || | ||||||| | || | Sbjct 859474 AAGACCCTTACCGGAAAGACCATCACTCTTGAGGTCGAGTCGTCCGACACCATCGACAAT 859415 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||||||||| || || || ||||| || || || || ||||| || Sbjct 859414 GTTAAGTCGAAGATCCAAGACAAGGAGGGCATTCCTCCTGACCAGCAGCGATTGATTTTC 859355 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||| || ||||| |||||| ||| | |||| || || ||||| || ||||||||| Sbjct 859354 GCCGGCAAGCAGCTTGAGGATGGCCGAACCCTGTCCGACTACAACATCCAGAAGGAATCG 859295 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||| | || | || | ||||| || Sbjct 859294 ACTCTTCACCTCGTCCTCCGTCTTCGCGGTGG 859263 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || || || || ||| || | Sbjct 859781 GATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTTGAGGTCGAATCCTC 859722 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||| ||||| || || || |||||||| || Sbjct 859721 GGATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCA 859662 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || ||||| || || || || ||||| ||||| | | | || || || || Sbjct 859661 ACAGCGATTGATTTTCGCTGGAAAGCAGCTCGAGGACGGTCGCACTCTTTCCGACTACAA 859602 Query 24883 CATTCAAAAGGA 24894 |||||| ||||| Sbjct 859601 CATTCAGAAGGA 859590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895980368640