Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq51 147 5e-30 >seq51 Length=278824 Score = 147 bits (162), Expect = 5e-30 Identities = 306/455 (67%), Gaps = 3/455 (1%) Strand=Plus/Minus Query 110686 TTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA-- 110743 |||| || ||| || | |||||||| ||||||||| ||| || |||| ||||| || Sbjct 149750 TTGTACCCATGCTACGTGTCTTCAATAACACTGCAAGATACGTAGATCAGGGTGGCAACA 149691 Query 110744 -GAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCT 110802 |||| ||| | || || ||||||||||| |||||||| || ||| | ||||| ||| Sbjct 149690 AGAGACCTGGTGCTTTCGCCATCTATCTCGAGCCTTGGCACTCGGATGTTTTTGAGTTCC 149631 Query 110803 TAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAA 110862 | || ||||| || || || || || ||| | || || ||| | || || Sbjct 149630 TTGATCTTCGAAAGAACCATGGCAAGGAGGAAGTTCGTGCCCGCGATCTCTTCCTGGCTC 149571 Query 110863 TGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGT 110922 | ||||| ||||| | |||||||| |||||| | | ||||| |||| | || |||| Sbjct 149570 TCTGGATCCCAGATCTCTTCATGAAGCGTGTTGAGAAGAATGGAGAGTGGACCCTCATGT 149511 Query 110923 GTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACG 110982 ||||| | | ||||||||| |||| || ||||| | ||||| || | ||| |||| Sbjct 149510 GTCCTAACGAATGCCCTGGTCTAGCTGACGTTTATGGCGATGAGTTCGAGGCCCTGTACG 149451 Query 110983 AAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCA 111042 | || || ||| ||| || ||| | | ||| ||||| | || |||| | Sbjct 149450 AGAAGTACGAAGCAGAGGGTCGCGGCCGCCAGAAGATTAAGGCTCAGAAGCTGTGGTACG 149391 Query 111043 AAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTA 111102 || || || | || ||| ||||||| ||| | || | || || ||||| | Sbjct 149390 CCATTCTCGAGGCTCAGACTGAGACTGGAAATCCCTTCATGCTTTACAAGGATCACTGCA 149331 Query 111103 ATCGCAAATCTAATCAAATGAATTTAGGAACAATT 111137 | ||||| |||||| | |||| | || || ||| Sbjct 149330 ACCGCAAGAGTAATCAGAAGAATCTTGGTACTATT 149296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186808420660768