Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq52 111 1e-19 seq14 93.3 3e-14 >seq52 Length=261245 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || |||||||| || || |||||||| |||||||| || || |||| || | ||| Sbjct 16367 ATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCGAGTTG 16426 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || ||||| || |||| |||||||| || | || | ||| || ||||| || || Sbjct 16427 CTTGCCGGCGAAGATCAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTT 16486 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 || | ||| ||| | ||||||||| || ||||| |||| ||||| || || || | Sbjct 16487 GGACTTGA-CATTGTCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTGCCCG 16545 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | | || || || ||||||||||| Sbjct 16546 TGAGGGTCTTGACGAAGATCTGCAT 16570 >seq14 Length=1021207 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | || | || || |||||||| || || |||||||| ||||| Sbjct 859554 CCACCACGCAGACGGAGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAA 859613 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| || | || ||||| || |||||||| ||||| || || | || Sbjct 859614 AGAGTGCGACCGTCCTCGAGCTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCGGGAGGA 859673 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| || ||| || | | | ||| | ||| || ||||| || Sbjct 859674 ATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGTTGTCGATGGTATCCGAGGATTCGAC 859732 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | || || || ||||||||||| Sbjct 859733 CTCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 859780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702846248960