Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq14 125 7e-24 seq25 111 2e-19 seq52 86.0 6e-12 >seq14 Length=1021207 Score = 125 bits (138), Expect = 7e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||| ||||| ||||||||||||||| || ||| || ||| ||| Sbjct 859572 ACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCG 859631 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || |||||||| ||||| || ||||| || || || || || || || Sbjct 859632 AGCTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGG 859691 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || || || ||||| || || ||||| ||||| || Sbjct 859692 ATCTTCGACTTGACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTG 859751 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718 || || | ||| || ||||| || ||||| |||| Sbjct 859752 CCAGTGAGAGTCTTGACGAAGATCTGCATCTTGT 859785 Score = 120 bits (132), Expect = 3e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || || |||||||| || |||||||||||| | ||| | || || Sbjct 859281 ACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCA 859340 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || |||||||| |||||||| || || || ||||| || || ||||| Sbjct 859341 AGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCTTGG 859400 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||||||||| || || || ||||| ||||| || Sbjct 859401 ATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTT 859460 Query 134685 CCGGTTAAAGTTTTAACGA 134703 ||||| | || || |||| Sbjct 859461 CCGGTAAGGGTCTTGACGA 859479 >seq25 Length=676740 Score = 111 bits (122), Expect = 2e-19 Identities = 165/233 (71%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || ||||| ||||| || |||||||||||| | Sbjct 267280 CCACCACGGAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 267221 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || || || ||||| || || |||| |||||| || ||||| || Sbjct 267220 AGAGTTCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGA 267161 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | |||||||| || ||||| Sbjct 267160 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 267101 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAAT-TTGCATTTTGT 134718 ||||| || || || || || || | || || ||||| | ||| |||| || Sbjct 267100 TCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGCTATTGAATTTCGT 267048 >seq52 Length=261245 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || ||| ||||| || |||||||||||| Sbjct 16344 CCACCACGGAGGCGGAGGACGAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 16403 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| ||||| || ||||| || || |||| |||||||| ||||| || Sbjct 16404 AGAGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCGGGGGGA 16463 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | |||||| || ||||| Sbjct 16464 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTAGACTCCACC 16523 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || | || || ||||| || ||||| Sbjct 16524 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 16570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396580565760