Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq8 138 9e-28 >seq8 Length=1312638 Score = 138 bits (152), Expect = 9e-28 Identities = 261/382 (68%), Gaps = 8/382 (2%) Strand=Plus/Plus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 || || ||| | || ||||| |||||| | ||||||||||| |||||||||||||| || Sbjct 920384 CCGAAGATTATCAACGGTCCGGAAATCCTTAATAAATATGTGGGTCAATCGGAAGAGAAC 920443 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCA-AAAGTTC 19547 || || ||||||| || || ||| ||| | | || | |||||| | | ||| Sbjct 920444 GTCAGAAAGATGTTTGCGGATGCAGAA-AAGGAGTACAAGGAGAAGGGCGAAGAGAGTGG 920502 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGT------TC 19601 || || || || || | |||||| ||||||| ||||||||||||||||| | Sbjct 920503 CTTACATATCATCATCTTCGATGAACTGGACGCTGTCTGTAAGCAAAGAGGTAGCGGGAC 920562 Query 19602 TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661 || | | ||| || |||| ||| ||||| || ||| | || ||| | |||||||| Sbjct 920563 AGGGGGCACTGGCGTTGGCGACAGTGTAGTCAACCAGCTCTTATCTAAACTTGACGGTGT 920622 Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721 | ||||| || || || || ||||||||||||| || || ||| | || || Sbjct 920623 GGATCAACTAAACAACATCTTGCTTATTGGCATGACGAACCGAAAGGATATGATTGATGA 920682 Query 19722 CGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATG 19781 || |||| ||||| ||||| | || | | | || ||| || || || || Sbjct 920683 TGCGCTATTGCGACCTGGTCGTCTCGAGGTCCATGTGGAGATTTCGTTGCCTGACGAGCA 920742 Query 19782 TGGACGTGTGGAAATTTTAAAC 19803 ||| ||||| ||||| ||||| Sbjct 920743 TGGTCGTGTACAAATTCTAAAC 920764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454604929440