Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq15 109 2e-18 seq51 84.2 7e-11 >seq15 Length=993015 Score = 109 bits (120), Expect = 2e-18 Identities = 128/172 (74%), Gaps = 1/172 (1%) Strand=Plus/Minus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||||| | |||| || | || || || | || || || | || || ||||| || Sbjct 219944 CACCTTCGCCCAGCGTCTTATTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCAGCGG-AG 219886 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 | || || |||||||||||| | || |||||||| ||||||| |||||||||||| | Sbjct 219885 CCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTTATGCCCGGTCTGACCTTCTCCA 219826 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||||||| || || ||||||||| |||| |||||||||||| || || Sbjct 219825 ACGAACTCATTTCGCGTGACGAGGGTCTGCACACCGACTTCGCCTGCCTGCT 219774 >seq51 Length=278824 Score = 84.2 bits (92), Expect = 7e-11 Identities = 212/318 (67%), Gaps = 6/318 (2%) Strand=Plus/Minus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 ||||||| |||| ||| | ||||| ||||| ||| || | ||||| ||||| || || Sbjct 149755 CGGCATTGTACCCATGCTACGTGTCTTCAATAACACTGCAAGATACGTAGATCAGGGTGG 149696 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACG 255090 | ||| | || || || ||| ||||||| || ||||| |||||| | || || Sbjct 149695 CAACAAGAGACCTGGTGCTTTCGCCATCTATCTCGAGCCTTGGCACTCGGATGTTTTTGA 149636 Query 255091 GTTTTTACTGCTGTCCGACAAGACC--GGCACCGAGGAGCTGATCGCCCGCGACATCTAC 255148 ||| | || | | ||| | ||| |||| ||||| | |||||||| ||| | Sbjct 149635 GTTCCT--TGATCTTCGAAAGAACCATGGCAAGGAGGAAGTTCGTGCCCGCGATCTCTTC 149578 Query 255149 ACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAG 255207 ||| ||||| | ||||| || ||| || || || | || |||| |||| Sbjct 149577 CTGGCTCTCTGGATCCCAGATCTCTTCATGAAGCGTGTTGAGAAGAATGGAGAG-TGGAC 149519 Query 255208 CCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAA 255267 |||||||||||| ||| || || ||||||| ||| || || || ||||| || Sbjct 149518 CCTCATGTGTCCTAACGAATGCCCTGGTCTAGCTGACGTTTATGGCGATGAGTTCGAGGC 149459 Query 255268 ACTGTATCTGGAGTACGA 255285 ||||| | ||||||| Sbjct 149458 CCTGTACGAGAAGTACGA 149441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588330139040160