Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq51 192 7e-44 seq15 127 3e-24 >seq51 Length=278824 Score = 192 bits (212), Expect = 7e-44 Identities = 945/1476 (64%), Gaps = 45/1476 (3%) Strand=Plus/Plus Query 117998 GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 118057 ||||||||| || ||| |||| || ||| |||||| | || || | | ||| || || Sbjct 148504 GATTTCCCAGACGGTCTTGTAAAGAGCCTTGATATCAGCAGGAATGTTCGGGATGTTCTG 148563 Query 118058 GATGGATCCACCCGCCTTGACCATGAGATCCTTCAT-ATCCTTT--GACCAGAGACCAAT 118114 || || || ||| | | | |||| | ||| | || || | ||||||||||| || Sbjct 148564 AATTGAACCGCCCTC---GGCAATGATACGGTTCTTCATGCTATCAGACCAGAGACCCAT 148620 Query 118115 CTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGG 118170 | || |||| | || || | || || || ||||| || |||||| Sbjct 148621 GTCAACAAGGTCCTTGAGCAACCAGGGG----TTAACGACCTGGAACTCGCCAGCGAGGA 148676 Query 118171 TGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATT 118229 || | ||| ||||| |||| ||||| ||||| ||||||||||||||||||| ||| Sbjct 148677 CACGGCG-AGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTCATTGTTACCCAGGATC 148735 Query 118230 TGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCC 118289 |||| |||| |||||||||||| || || | | | |||||| || | ||| |||| Sbjct 148736 TGGGATGTGCTGGCTGTGGGCATAGGGGCGACCAACAAGCTGTTGCGCACACCATTTTGT 148795 Query 118290 CTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATA 118349 | || | |||||||| | |||||| | | || | | |||||| Sbjct 148796 TTGATTTGCTCCTTGAGGCTGGTCCAGTCCCAAAGATCCGATGGGGTGACATTCCACATG 148855 Query 118350 TCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCA 118409 || | || ||||| || || || | || || || || | || || ||||| ||| Sbjct 148856 TCGTATTGAAGGATGCCCTGCGAGACGGGAGAACCTTCGTAGGTAGAGTAAGGGCCTTCA 148915 Query 118410 ACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGA 118469 |||| || | || | ||| | ||| || || || || || || || || | Sbjct 148916 ACCTTAGCAATCTCCATGGACGCAGTCAAGGCGGCATGGTAGATCGTCTCGAAGATCTGC 148975 Query 118470 GCATTCA-TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATC 118528 |||| ||| || | |||| || ||||| | | || | | ||| || Sbjct 148976 TTGTTCAATTGTCTAG-CCTCTGGCGACTCAAAGGGCATACGCAATGCCAAGAATGTGTC 149034 Query 118529 CGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGT 118588 || ||||| || ||||| |||||||| || || |||| ||| || || || || | Sbjct 149035 AGCAAGACCCTGAACACCAAGGCCAATGGGACGGTGTCGCATGTTGCTGTTGCGGGCC-T 149093 Query 118589 CTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 118647 || ||||| ||| |||| ||| || | || || | ||| | ||| || | | Sbjct 149094 CTGGGACGGGGTAATAATTGACATCAATGATTCTGTTCAAATTGTGAACGACGACTTGGG 149153 Query 118648 TGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAA 118707 | | ||||| | ||| | | | ||| || ||| || | || | || || |||| Sbjct 149154 TAACCTCATGCAACTTCTGGAAGTCATAAGTGCCT---TCGTTATAGTCA-ACGAAGGAG 149209 Query 118708 GG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || |||| || || | || || |||| |||||| | | |||||| || Sbjct 149210 GGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCGATG 149269 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||||| | || || || ||| || || | ||||| ||||| ||| | Sbjct 149270 ATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCTTCTGATTACTCTTGCGG 149329 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || |||||||||||||||| | || | || ||||| || || | || |||||| Sbjct 149330 TTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATG 149389 Query 118884 GCCTTCCAGA-CATCGGCAGCTGGCACAG-TGGCGTTGGCTCGCCCCTCTTCCTCGTACT 118941 || | ||| | | || | || | ||||| | | || |||||| | ||||||| Sbjct 149390 GCGTACCACAGCTTCTGAGCCTTAATCTTCTGGCG--GCCGCGACCCTCTGCTTCGTACT 149447 Query 118942 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 119001 | ||| ||||| || ||||| || || | || | || || || || || | Sbjct 149448 TCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAGACCAGG-GCATTCGTTA 149506 Query 119002 GG-CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 119060 || || | ||| | ||| | ||| || |||||| |||||||||||||| ||||||||| Sbjct 149507 GGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCTGGGATC 149566 Query 119061 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 119120 ||||| ||| ||||||||| || ||| |||| || | || || || || | Sbjct 149567 CAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGA 149626 Query 119121 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---C 119176 || | || || | | ||||| |||||| || || || || | |||| | ||| Sbjct 149627 TCAAGGAACTCAAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCGAAAGCACCAGGT 149686 Query 119177 CTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGG 119236 || | | ||| |||| | ||| || || |||||| || || ||||| ||||| || Sbjct 149687 CTCTTGTTG-CCACCCTGATCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGG 149745 Query 119237 AATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACA 119294 | || || | || ||| || || || || || ||| | | | || | || Sbjct 149746 TACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCC--AGTAGCACGGATG 149803 Query 119295 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 119354 ||| |||| | ||||||||| || ||| ||| ||||| || || | |||| Sbjct 149804 CGGTGAATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCACAGGTCTTGAGG 149863 Query 119355 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 119414 || | ||||| || || || ||| | || | ||| ||||||||| ||| | Sbjct 149864 GTGTCATAGATACCCTCAATGCTGTCGTCTTTCATGTCGACGAGGAAGCAAGACGAGAGC 149923 Query 119415 TGAGGCCT-GGGTGTACCAGCGTTGAAGAGAGTTGG 119449 || ||||| |||||| ||||| |||||||||||||| Sbjct 149924 TG-GGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGG 149958 >seq15 Length=993015 Score = 127 bits (140), Expect = 3e-24 Identities = 342/514 (67%), Gaps = 17/514 (3%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| |||||||||||||| || |||||||| || |||||| |||||| ||||| ||||| Sbjct 219794 GTGCAGACCCTCGTCACGCGAAATGAGTTCGTTGGAGAAGGTCAGACCGGGCATAAGACC 219853 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || | | || | || ||||||||| ||||| || Sbjct 219854 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCGCTGAAGAAGATACCCTCAACGGC 219913 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGT-ATCAAACCACTTCAT 130203 ||||| |||| ||||||| || |||| ||||| |||| ||| ||| | || Sbjct 219914 GGCGAAGGCAATAAGACGCTGGGCGAAGG---TGGACTTCTTGTCGGCAATCCAGTGCAG 219970 Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 130263 ||||| | ||||| || ||| || || | ||||| || || | ||||| | | Sbjct 219971 AGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCTCAATAGCATTGAAGAGATGTGT 220030 Query 130264 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGAC 130323 ||| | | || || |||||||| | || ||||| || || || ||| |||| Sbjct 220031 CTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGAGAGTACGTCTCGGAGTGGAT 220090 Query 130324 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 130382 | | ||| || | ||| | ||||||| | || || || ||||| |||||| Sbjct 220091 GTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCTGGGATCTGAACCTCAC 220149 Query 130383 CTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 130439 | | ||||| | | || | || || ||||| || ||||| | || || || | Sbjct 220150 CAG-AAAATCG--CTCGACAAGGTTTTCGTTGACAATGCCGTCGGATGCGGCGAAGAAGG 220206 Query 130440 CCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAA 130496 | || || | ||||| || || | || || | || | |||| |||| | Sbjct 220207 CGAGAATGTGGGAGATGAAGAACTTCTCGTCGTCATTTAGGCGGTTGCTCCAATCGTGGA 220266 Query 130497 GATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||||||| || ||||| | |||||| |||||||| Sbjct 220267 GATCCTTGGATAGATCAATCTCCTCGGCAGTCCA 220300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432973633280