Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq51 309 4e-79 seq15 143 3e-29 >seq51 Length=278824 Score = 309 bits (342), Expect = 4e-79 Identities = 1140/1748 (65%), Gaps = 51/1748 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| ||||||| ||||| |||| || || || || |||| ||| Sbjct 150066 CCACAGCACATGATCATGCGTGTGGCTGTCGGCATCTGGGGTGATGATGTTGAGAAAGTC 150007 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | |||| ||| || ||||| ||| || |||| ||| || | ||||| |||| Sbjct 150006 ATTCAGACCTACAACCTCATGTCTAGCAAA-TAC-TTCACTCATGCTTCCCCAACTCTCT 149949 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||||||||| ||||| |||| | || ||||||||| ||| || || || | Sbjct 149948 TCAATGCTGGAACACCCCAGGCCCAGCTCTCGTCTTGCTTCCTCGTCGACATGAAAGACG 149889 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | |||||||||| || || | | ||||| ||||| ||| ||| | Sbjct 149888 ACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCCG 149829 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | |||||||| | |||| || | | || | | || ||| || || | Sbjct 149828 GTGGTATTGGTCTCAACATTCACCGCATCCGTGCTACTGGCTCATACATTGCTGGCACTA 149769 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || || | || ||| | || ||||| || || || || ||| || | || | Sbjct 149768 ACGGCACCTCGAACGGCATTGTACCCATGCTACGTGTCTTCAATAACACTGCAAGATACG 149709 Query 104580 TAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635 || |||| | ||| | | | || || || |||| ||||||| ||||| |||||| Sbjct 149708 TAGATCAGGGTGG-CAACAAGAGACCTGGTGCTTTCGCCATCTATCTCGAGCCTTGGCAC 149650 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 ||||| | | ||||||||||| | || ||||| || | ||||| | || | Sbjct 149649 TCGGATGTTTTTGAGTTCCTTGATCTTCGAAAGAACCATGGCAAGGAGGAAGTTCGTGCC 149590 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 |||||||||||| ||||||||||| |||||||||||||||||| | |||||| ||| | Sbjct 149589 CGCGATCTCTTCCTGGCTCTCTGGATCCCAGATCTCTTCATGAAGCGTGTTGAGAAGAAT 149530 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 || | ||| | ||| | ||||| || || || |||||||| | || | || || Sbjct 149529 GGAGAGTGGACCCTCATGTGTCCTAACGAATGC-CCTGGTCTAGCTGACGTTTATGGCGA 149471 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGTG 104872 ||||| || ||||| ||| |||||||| | ||| |||| ||| | || || | | Sbjct 149470 TGAGTTCGAGGCCCTGTACGAGAAGTACGAAGCAGAGGGTC--GCGGCCGCCAGAAGATT 149413 Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 ||| | || | ||||| | || |||||| || |||| || |||||||| | || | Sbjct 149412 AAGGCT-CAGAAGCTGTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGAAATCCCTT 149354 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||||||||||| || ||| |||| ||||||||||| |||||| | ||| || Sbjct 149353 CATGCTTTACAAGGATCACTGCAACCGCAAGAGTAATCAGAAGAATCTTGGTACTATTCG 149294 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 || || ||||| || || || ||| | || | | | | |||||| |||||| || Sbjct 149293 CAGCTCGAATCTTTGCACCGAGATCATCGAGTACTCCGCCCCTGATGAGGTGGCTGTCTG 149234 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACATTTGAT 105109 ||| | || || |||| | ||| | || || | | | || ||| || | ||| Sbjct 149233 CAACTTAGCTTCCCTCGCGTTGCCCTCCTTCGTTGA-CTATA-ACGAAGGCACTTATGAC 149176 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | | || | || || ||||| || ||| | || | |||||| | |||||| Sbjct 149175 TTCCAGAAGTTGCATGAGGTTACCCAAGTCGTCGTTCACAATTTGAACAGAATCATTGAT 149116 Query 105170 AGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228 |||| ||||||||| ||| || || || || ||| |||||||||| ||||| Sbjct 149115 GTCAATTATTACCCCGTCCCAGA-GGCCCGCAACAGCAACATGCGACACCGTCCCATTGG 149057 Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCG 105287 || |||||||||||||| || || |||| | | ||| || | ||||| || Sbjct 149056 CCTTGGTGTTCAGGGTCTTGCTGACACATTCTTGGCATTG-CGTATGCCCTTTGAGTCGC 148998 Query 105288 ACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGG 105347 || || | || | || || || || ||||| || || || ||||| ||||| Sbjct 148997 CAGAGGCTAGACAATTGAACAAGCAGATCTTCGAGACGATCTACCATGCCGC-CTTGA-C 148940 Query 105348 CGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 | || || ||| | || ||||||| || || || |||| || |||||||| | Sbjct 148939 TGCGTCCATGGAGATTGCTAAGGTTGAAGGCCCTTACTCTACCTACGAAGGTTCTCCCGT 148880 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTCACTACGACT 105464 || || || | ||||||| || |||| |||| || | ||| | || | |||| Sbjct 148879 CTCGCAGGGCATCCTTCAATACGACATGT-GGAATGTCACCCCATCGGATCTTTGGGACT 148821 Query 105465 GG-GAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 || ||| |||||||| | ||||| | || ||| | || ||||| | | | || Sbjct 148820 GGACCAGC-CTCAAGGAGCAAATCAAACAAAATGGTGTGCGCAACAGCTTGTTGGTCGCC 148762 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 || ||||| |||||| ||| | || ||| ||||||| ||||| ||||| || || ||| Sbjct 148761 CCTATGCCCACAGCCAGCACATCCCAGATCCTGGGTAACAATGAGTGCTTCGAGCCTTAC 148702 Query 105584 ACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCA 105642 || | |||||||| ||| | | |||||| || ||||| | | || || | Sbjct 148701 ACTTCCAACATCTACTCT-CGCCGTGTCCTCGCTGGCGAGTTCCAGGTCGTTAA----CC 148647 Query 105643 TCTCGTGG----ATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 105698 || || | | ||||| || || ||||||||||| | |||||| | | | Sbjct 148646 CCTGGTTGCTCAAGGACCTTGTTGACATGGGTCTCTGGTCTGATAGCATGAAGAACCGTA 148587 Query 105699 TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGT 105758 | | | ||| ||||| ||||| || || | | ||||| ||| || ||| Sbjct 148586 TCATTGCCGAGGGCGGTTCAATTCAGAACATCCCGAACATTCCTGCTGATATCAAGGCTC 148527 Query 105759 TGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCCGCAGATCG 105816 | ||| || || ||||||| || | ||| ||| | | |||||||| || || Sbjct 148526 TTTACAAGACCGTCTGGGAAATCTCCCAACGAA--CTGTTGTCCAGATGGCCGCTGACCG 148469 Query 105817 TGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCAT--GGAAAGTCCAACGATG 105874 |||| |||||||| || ||| | ||| || ||| || || || || ||| Sbjct 148468 TGGTGCGTTCATTGACCAGTCCCAATCACTAAATATCCACATGAGGGAA--CCCACTATG 148411 Query 105875 TCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTAT 105934 |||| || | ||||||| | | | |||||| || || || || || ||||| Sbjct 148410 GGCAAGATCACCAGTATGCACTTCACCGGCTGGAAGCTTGGCCTGAAGACTGGCATGTAC 148351 Query 105935 TACCTCCG 105942 |||||||| Sbjct 148350 TACCTCCG 148343 >seq15 Length=993015 Score = 143 bits (158), Expect = 3e-29 Identities = 348/515 (68%), Gaps = 19/515 (4%) Strand=Plus/Minus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497 |||||||| || ||| | ||||| || |||||| | ||||||||| | | ||||| Sbjct 220300 TGGACTGCCGAGGAGATTGATCTATCCAAGGATCTCCACGATTGGAGCAACCGCCTAAAT 220241 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || | || ||| ||||| |||| || || ||||| || | |||||| || ||| Sbjct 220240 GACGACGAGAAGTTCTTCATCTCCCACATTCTCGCCTTCTTCGCCGCATCCGACGGCATT 220181 Query 94558 GTTTTTGAGAA---TATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAG 94613 || || || | || | | | ||| ||| |||||| || |||| | || || | Sbjct 220180 GTCAACGAAAACCTTGTCGAG--CGATTTT-CTGGTGAGGTTCAGATCC-CAGAGGCCCG 220125 Query 94614 ATCCTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAAC 94672 || |||||| | | ||| |||| ||| | | | || ||||| ||| | | Sbjct 220124 ATGCTTCTACGGCTTCCAGA-TCATGATGGAGAACATCCACTCCGAGACGTACTCTCTCC 220066 Query 94673 TCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAA 94732 |||| |||| || || ||||| ||| |||||| || ||||| | || || | | Sbjct 220065 TCATTGACACCTACATCAAGGAGCCTGCCCAGAAGACACATCTCTTCAATGCTATTGAGA 220006 Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGT 94789 | |||| || || | ||||| || || |||||| || | ||| ||| |||| ||| Sbjct 220005 CCATTCCTTGCATCCGCAAGAAGGCCGACTGGGCTCTGCACTGGATTGCCGACAAGAAGT 219946 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | |||| || |||| || | || || || |||||||||||||||||| | Sbjct 219945 CCA---CCTTCGCCCAGCGTCTTATTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCAGCG 219889 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 | ||||| | || | |||||||||||||| ||||| ||||| ||||| ||||| Sbjct 219888 GAGCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTTATGCCCGGTCTGACCTTCT 219829 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||||| || || || ||||||||||| || ||| Sbjct 219828 CCAACGAACTCATTTCGCGTGACGAGGGTCTGCAC 219794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258700261120