Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq51 212 7e-50 seq14 181 1e-40 seq52 172 6e-38 seq25 149 7e-31 >seq51 Length=278824 Score = 212 bits (234), Expect = 7e-50 Identities = 912/1423 (64%), Gaps = 34/1423 (2%) Strand=Plus/Plus Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGA-TACAGGTTTGTAGTGTAAGGCTCAAATGCCTC 80414 ||||| || |||||| || || ||| || | ||| | |||||||||||| || ||| Sbjct 148661 AACTCGCCAGCGAGGACACGGCG-AGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTC 148719 Query 80415 GTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATT 80474 ||||| || |||||||| | ||||| || || ||||| ||| ||||||||| || Sbjct 148720 ATTGTTACCCAGGATCTGGGATGTGCTGGCTGTGGGCATAGGGGCGACCAACAAGCTGTT 148779 Query 80475 CCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGACCAAAAATCAACC--CCAACG 80532 |||| || | | ||||| | ||| | | ||| | | ||| || | | Sbjct 148780 GCGCACACCATTTTGTTTGATTTGCTC-CTTGAGGCTGGTCCAGTCCCAAAGATCCGATG 148838 Query 80533 CTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACG 80590 ||||| ||||||||||| || | |||||||| ||| | ||||| || || | | Sbjct 148839 GGGTGACATTCCACATGTCGTATTGAAGGATGCCCTGCGAGACGGGAGAACCTTCGTAGG 148898 Query 80591 TCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAA 80650 | ||| ||||| || ||| || | ||| ||| | | | ||| || || || | Sbjct 148899 TAGAGTAAGGGCCTTCAACCTTAGCAATCTCCATGGACGCAGTCAAGGCGGCATGGTAGA 148958 Query 80651 TGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCA 80710 | ||| |||| |||||||| | |||| ||| || || | || | || Sbjct 148959 TCGTCTCGAAGATCTGCTTGTTCAATTGTCTAGCCTCTGGCGACTCAAAGGGCATACGCA 149018 Query 80711 TCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGT 80770 || ||| |||||| || |||||||| || | | | || || ||||| ||| ||| Sbjct 149019 ATGCCAAGAATGTGTCAGCAAGACCCTGAACACCAAGGCCAATGGGACGGTGTCGCATGT 149078 Query 80771 T-CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTG 80829 | | | || |||||| || | |||||| | || ||| |||| | ||||| ||| Sbjct 149079 TGCTGTTGCG-GGCCTCTGGGACGGGGTAATAATTGACATCAATGATTCTGTTCAAATTG 149137 Query 80830 CGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA------TTGGTTCCCC 80883 | || || | ||||| ||||| | ||||| ||||| | || ||| Sbjct 149138 TGAACGACGACTTGGGTAACCTCATGCAACTTCTGGAAGTCATAAGTGCCTTCGTTATAG 149197 Query 80884 TTCACAAATGCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATC 80942 | || || | || || || ||||| || | ||||| || |||||||| |||| | Sbjct 149198 TCAACGAAGGAGGGCAACGCG-AGGGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGC 149256 Query 80943 TGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTG 81002 | |||||| ||| || ||||| | ||| || ||| ||||| || || ||||| Sbjct 149257 GGAGTACTCGATGATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCTTCTG 149316 Query 81003 GTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062 || |||| |||||| |||||||| |||| | || | || ||||| ||| Sbjct 149317 ATTACTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTG 149376 Query 81063 TGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTC 81122 | || ||| ||||||| ||| | || | ||||| | | || |||| || || Sbjct 149377 AGCCTCGAGAATGGCGTACCACAGCTTCTGAGCCTTAATCTTCTGGCGGCCGCGACCCTC 149436 Query 81123 GGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGG 81182 || | ||||| |||| | ||||||| | || | || |||| || | || Sbjct 149437 TGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAGACCAGG 149496 Query 81183 GCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGC 81242 ||| |||||||| ||||| ||| ||| || | ||||| ||| ||||||||| Sbjct 149497 GCATTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAG 149556 Query 81243 GTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTT 81302 || ||||||||||| || ||| || |||||| || | ||||| | || ||||| Sbjct 149557 ATCTGGGATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTT 149616 Query 81303 GAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGAT 81362 || | || || || || | | |||| ||||| ||||| ||||| | ||||| Sbjct 149617 CTTTCGAAGATCAAGGAACTCAAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCGAA 149676 Query 81363 CG-AC-----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATAC 81416 | || | |||| ||||||||| | ||||| | ||||| || || || Sbjct 149677 AGCACCAGGTCTCTTG---TTGCCACCCTGATCTACGTATCTTGCAGTGTTATTGAAGAC 149733 Query 81417 ACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTT 81476 ||| | ||| || | || || | || ||||| || || | || || || | Sbjct 149734 ACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGT 149793 Query 81477 GGCGCGCACCTTGC--TGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGC 81533 || || | ||| ||| || ||||| || ||||| | | ||| || ||| || Sbjct 149794 AGCACGGA---TGCGGTGAATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGC 149850 Query 81534 ACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAA 81593 ||| || | ||| ||||| || ||||| ||||| || | ||||||||| | | ||| Sbjct 149851 ACAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCGTCTTTCATGTCGACGAGGAA 149910 Query 81594 ACAGCTTGACATCTGAGGGCT-TTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAA 81652 || || | ||| || || || || |||||||| || ||||||| || ||| Sbjct 149911 GCAAGACGAGAGCTG-GGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAAGCATGAG 149969 Query 81653 TGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGT 81712 |||| || | | ||||| |||| ||||| | |||| || ||| ||||| Sbjct 149970 TGAAGTATTTGCTAGACATGAGGTTGTAGGTCTGAATGACTTTCTCAACATCATCACCCC 150029 Query 81713 GAATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755 || |||| ||| |||||||| | ||||| ||| || |||| Sbjct 150030 AGATGCCGACAGCCACACGCATGATCATGTGCTGTGGTCTCTC 150072 >seq14 Length=1021207 Score = 181 bits (200), Expect = 1e-40 Identities = 169/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| |||||||| ||||| || ||||||||||| ||||| || | ||| | Sbjct 859477 GTCAAGACCCTTACCGGAAAGACCATCACTCTTGAGGTCGAGTCGTCCGACACCATCGAC 859418 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| | || || || ||||||||||| |||||||| ||||||||||| | ||| Sbjct 859417 AATGTTAAGTCGAAGATCCAAGACAAGGAGGGCATTCCTCCTGACCAGCAGCGATTGATT 859358 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| || ||||||| || ||||| | ||||| || |||| |||||| Sbjct 859357 TTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTGTCCGACTACAACATCCAGAAGGAA 859298 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||||||| || ||| | |||||||||||||| Sbjct 859297 TCGACTCTTCACCTCGTCCTCCGTCTTCGCGGTGG 859263 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || ||||||||||| || || Sbjct 859780 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTTGAGGTCGAATCCTCG 859721 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||| | || || |||||||||||||| |||||||| ||||| Sbjct 859720 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAA 859661 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| ||||| ||||| |||||||| | ||| || || | ||||| || Sbjct 859660 CAGCGATTGATTTTCGCTGGAAAGCAGCTCGAGGACGGTCGCACTCTTTCCGACTACAAC 859601 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||| || || || ||| | ||||| || ||||| Sbjct 859600 ATTCAGAAGGAGAGCACCCTCCACCTTGTCCTCCGTCTGCGTGGTGG 859554 Score = 140 bits (154), Expect = 4e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | || || ||||||||||| || || ||||| || Sbjct 859033 ATGCAGATTTTCGTCAAGACATTGACGGGAAAGACTATTACCCTAGAAGTTGAATCTTCC 858974 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||| || |||||||||||||| || |||||||| || ||| Sbjct 858973 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 858914 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || ||||||||||| || || |||| ||| ||| || || || || Sbjct 858913 CAACGTCTCATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCTTAAGCGATTACAAC 858854 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||| || || | || | ||||| || || ||||| Sbjct 858853 ATCCAGAAGGAGTCCACGCTCCACTTGGTTCTCCGTCTCCGTGGAGGACA 858804 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || ||||||||||| || ||||||||||| ||||| Sbjct 859261 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACGATCACTCTTGAGGTGGAGTCTTCG 859202 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || | || || ||||||||||| ||||| || || ||||| Sbjct 859201 GACACGATCGACAACGTCAAATCCAAGATCCAGGACAAGGAAGGAATCCCGCCCGACCAA 859142 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || || || || ||||| |||||||| | ||||||| || || || ||| ||||| || Sbjct 859141 CAACGACTTATCTTTGCGGGTAAGCAGTTGGAGGATGGCCGAACACTGAGC-GACTACAA 859083 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || ||||| || ||||| || || || | | ||||| ||||| Sbjct 859082 TATTCAGAAGGAGTCAACTCTGCACCTTGTTCTCAGACTTCGTGGTGG 859035 >seq52 Length=261245 Score = 172 bits (190), Expect = 6e-38 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || ||||||||||| || |||||||| ||||| Sbjct 16573 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCT 16514 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||| | ||| | ||| | || || |||||||||||||| ||||| || ||| Sbjct 16513 AGCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCCGAC 16454 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| || || || || || ||||||||||| || | ||||| || | ||||| Sbjct 16453 CAGCAGCGACTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACTCTCTCCGACTAC 16394 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| |||||||| ||| | || || || ||||| Sbjct 16393 AACATCCAGAAGGAGAGCACCCTTCATCTCGTCCTCCGCCTCCGTGGTGG 16344 >seq25 Length=676740 Score = 149 bits (164), Expect = 7e-31 Identities = 171/229 (75%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 27405 AATGCAA-ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAG 27463 ||| ||| | ||| || ||||| || || ||||||||||| || || ||||| ||||| Sbjct 267052 AATTCAATAGCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCTT 267111 Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| | ||| | || || |||||||||||||| ||||| || |||| Sbjct 267112 CCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACC 267171 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 | |||||||| || || || || |||||||| ||||| | || || || | ||||| | Sbjct 267172 AACAGCGTCTGATCTTCGCCGGCAAGCAACTTGAGGACGGCCGAACTCTTTCCGACTACA 267231 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| ||||| || || || ||| | ||||| || ||||| Sbjct 267232 ACATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGTCTCCGTGGTGG 267280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570308346882560