Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 5e-12 >seq7 Length=1567828 Score = 86.0 bits (94), Expect = 5e-12 Identities = 265/404 (66%), Gaps = 12/404 (3%) Strand=Plus/Minus Query 30062 ACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118 ||||| ||||| | ||||| |||||||| || || |||| || ||| || Sbjct 114705 ACGTAGAACTGTGCAAACATG---TGGCACGGCGGGAGCACCATCTTCTTCAGGTCCTTC 114649 Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30178 |||||||| ||| | | ||| ||||| | || | |||||||||| | || | | Sbjct 114648 GGGTTCCACGCGGAAAGGATCATGCGGCGATCGTACGGGTTGTTCCGCAGCTTGTGTATG 114589 Query 30179 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30238 ||| |||||| || ||| || | |||||||| | || || ||||| Sbjct 114588 ACGTCGGCCAGCTGGTCGTAACCCTGGCCGGTGTAGTCTGTCTTCGCATCGACATACTCA 114529 Query 30239 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30298 || ||||| || | ||||||||| ||||| || || |||||||| || | || | | | Sbjct 114528 GCGCCGAAGTGGCGCCACTGGAAGCCGTAAACGGGACCCAGGTCGCCGACCTCGCGTTCC 114469 Query 30299 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC--CC 30356 | ||| ||||| | || || | ||| || ||| ||||||||||||| || || Sbjct 114468 GTCAGTCCCAAGTTGTCGAGGAACTCGCGGGATCCATTGCCGTCCCAGATCTTGACATCC 114409 Query 30357 CCTTCTCAGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCC 30415 ||| | |||| | ||| ||| ||||| || |||||| || ||||| | Sbjct 114408 TGTTCGCTAAGAG--ATGAGGACGAGGTGTTTCCCTC-GATGAACCAGAGTAGCTCGGCA 114352 Query 30416 ACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 | |||||| ||||| | ||| ||||| |||||||| || Sbjct 114351 ATGACGGCGCGTAGGAAGACGCGCTTCGTCGTTAGGAGGGGTAA 114308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406308973850496