Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq14 122 8e-23 >seq14 Length=1021207 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| ||||||| || ||||| ||| | ||| Sbjct 859033 ATGCAGATTTTCGTCAAGACATTGACGGGAAAGACTATTACCCTAGAAGTTGAATCTTCC 858974 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||| |||||||| || || ||||| Sbjct 858973 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 858914 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| || || || ||||||| || ||| | |||||||||| Sbjct 858913 CAACGTCTCATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCTTAAGCGATTACAAC 858854 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| || | || |||||| | ||| | || || || Sbjct 858853 ATCCAGAAGGAGTCCACGCTCCACTTGGTTCTCCGTCTCCGTGGAGG 858807 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || |||||| | || |||||||| || ||| | || Sbjct 859780 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTTGAGGTCGAATCCTCG 859721 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || || ||||| || || || || ||||| ||| Sbjct 859720 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAA 859661 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| || || || | || ||| || || ||||||| |||||| Sbjct 859660 CAGCGATTGATTTTCGCTGGAAAGCAGCTCGAGGACGGTCGCACTCTTTCCGACTACAAC 859601 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||| ||| | || | || | ||| |||| |||||||| Sbjct 859600 ATTCAGAAGGAGAGCACCCTCCACCTTGTCCTCCGTCTGCGTGGTGGCAT 859551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916834293760