Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 1e-14 >seq7 Length=1567828 Score = 95.1 bits (104), Expect = 1e-14 Identities = 360/565 (64%), Gaps = 55/565 (10%) Strand=Plus/Plus Query 34325 GTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCT 34384 || ||||||||||||| | || || || || || || ||||| ||| | | Sbjct 114413 GTCAAGATCTGGGACGGCAATGGATCCCGCGAGTTCCTCGACAACTTGGGACTGACGGAA 114472 Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444 || |||| |||||| |||| || || ||||| ||||||||| | ||||| || || ||| Sbjct 114473 CGCGAGGTCGGCGACCTGGGTCCCGTTTACGGCTTCCAGTGGCGCCACTTCGGCGCTGAG 114532 Query 34445 TATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT 34503 ||| | | |||||| | ||||| | || ||||| ||||||||| |||| || Sbjct 114533 TAT-GTCGATGCGAAGACAGACTACACCGGCCAGGGTTACGACCAGCTGGCCGACGTCAT 114591 Query 34504 CGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563 ||| || | ||||| | || | | || | | | ||||||||||||||| Sbjct 114592 ACACAAGCTGCGGAACAACCCGTACGATCGCCGCATGATCCTTTCCGCGTGGAACCCGAA 114651 Query 34564 GGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGTCGCG- 34621 ||| || ||||| |||||| |||||||||| | ||| || |||||||| || Sbjct 114652 GGACCTGAAGAAGATGGTGCTCCCGCCGTGCCACA-TGTTTGCACAGTTCTACGTTTCGT 114710 Query 34622 -----------------------AATGGGGA-----------------GCTGTC----CT 34637 |||||||| || || || Sbjct 114711 TCCCGAGGCAAAGCGAGGAGAGCAATGGGGACCAGAGCAAGCCAAAGGGCCATCTCCACT 114770 Query 34638 GCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTT 34697 ||||| | || ||||| || | |||||||| | || || |||||||| || || |||| Sbjct 114771 GCCAGTTATACCAACGGTCCTGCGACATGGGCCTCGGTGTCCCGTTCAATATCGCAAGTT 114830 Query 34698 ACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGT-TGGTTCCTGGGGAGCTGGTG 34756 |||| ||||| || ||||| |||| ||||| ||| | | | || || || ||| Sbjct 114831 ACGCGCTGCTGACACACATGCTCGCGCATGT-GTGCGATCTAGTGCCAGGCAGCCTG--A 114887 Query 34757 CATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGC 34814 || |||| |||| ||||| || | || | ||||| |||| || | | |||| Sbjct 114888 CACACGTCATGGGTGATGCTCACGTGTATGTCGACCACGTCGACGCCCTGAAGGTTCAGC 114947 Query 34815 TGCAACGAGAGCCCCGACCGTTCCC 34839 | ||||||| || || |||||||| Sbjct 114948 TCGAACGAGAACCGCGGCCGTTCCC 114972 Score = 95.1 bits (104), Expect = 1e-14 Identities = 360/565 (64%), Gaps = 55/565 (10%) Strand=Plus/Minus Query 6506 GGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAG 6565 |||||||| || || ||||||| ||||| | | || |||| ||||| | || Sbjct 114972 GGGAACGGCCGCGGTTCTCGTTCGAGCTGAACCTTCAGGGCGTCGACGTGGTCGACATAC 114913 Query 6566 ATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCA-ACCCCACGACATGA 6622 | || ||||| |||| |||| || ||| || || || | | | ||| ||||| Sbjct 114912 ACGTGAGCATCACCCATGACGTGTGT--CAGGCTGCCTGGCACTAGATCGCAC-ACATGC 114856 Query 6623 GCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATG 6682 |||| ||||| || ||||| |||||||| || || |||||||| || || | |||||| Sbjct 114855 GCGAGCATGTGTGTCAGCAGCGCGTAACTTGCGATATTGAACGGGACACCGAGGCCCATG 114796 Query 6683 TCTCCCGATCGTTGATAGAGCTGGCAG----GACAGC-----------------TCCCCA 6721 || | || ||||| || | ||||||| || || |||||| Sbjct 114795 TCGCAGGACCGTTGGTATAACTGGCAGTGGAGATGGCCCTTTGGCTTGCTCTGGTCCCCA 114736 Query 6722 TT------------------------CGCGACGTAGAATTG-GCAGAGGGTGTGGCACGG 6756 || || |||||||| || ||| | |||||||||| Sbjct 114735 TTGCTCTCCTCGCTTTGCCTCGGGAACGAAACGTAGAACTGTGCAAACA-TGTGGCACGG 114677 Query 6757 GGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTC 6816 |||||| ||||| || |||||||||||||||||| | | | || | | || Sbjct 114676 CGGGAGCACCATCTTCTTCAGGTCCTTCGGGTTCCACGCGGAAAGGATCATGCGGCGATC 114617 Query 6817 ATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGA 6876 | ||||| | || ||| || |||| ||||||||| ||||| || | Sbjct 114616 GTACGGGTTGTTCCGCAGCTTGTGTATGACGTCGGCCAGCTGGTCGTAACCCTGGCCGGT 114557 Query 6877 ATAGTCCG-CTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGA 6935 ||||| | |||||| | | |||||| || || ||||| | ||||||||| ||||| | Sbjct 114556 GTAGTCTGTCTTCGCATCGAC-ATACTCAGCGCCGAAGTGGCGCCACTGGAAGCCGTAAA 114498 Query 6936 CCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAG 6995 | || |||| |||||| |||| || | | ||| ||||| || || || || | Sbjct 114497 CGGGACCCAGGTCGCCGACCTCGCGTTCCGTCAGTCCCAAGTTGTCGAGGAACTCGCGGG 114438 Query 6996 ACCCGTGAGCGTCCCAGATCTTCAC 7020 | || | ||||||||||||| || Sbjct 114437 ATCCATTGCCGTCCCAGATCTTGAC 114413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448260786255360