Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq51 219 6e-52 seq15 114 2e-20 >seq51 Length=278824 Score = 219 bits (242), Expect = 6e-52 Identities = 1187/1878 (63%), Gaps = 47/1878 (3%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || ||||| || || | || || | || |||||| || |||||||| ||||| || || Sbjct 148310 GTGAACTGGATAGGTGCAGCAGCAGCTTGTGTACGGAGGTAGTACATGCCAGTCTTCAGG 148369 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || || |||| ||| ||| ||||| || || | ||| | | || || || Sbjct 148370 CCAAGCTTCCAGCCGGTGAAGTGCATACTGGTGATCTTGCCCATAGTGGGTTCCCTCATG 148429 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 || ||||| | || || || || ||||| || || | ||||| ||||| | | | Sbjct 148430 TGGATATTTAGTGATTGGGACTGGTCAATGAACGCACCACGGTCAGCGGCCATCTGGACA 148489 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 | || ||| | |||||||| | || ||| ||| ||||||||| | |||| | Sbjct 148490 ACAGTTCGTTGGGAGATTTCCCAGACGGTCTTGTAAAGAGCCTTGATATCAGCAGGAATG 148549 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 || | | || ||||| ||||| || || | || || ||||| || |||| | Sbjct 148550 TTCGGGATGTTCTGAATTGAACCGCCCTCGGCAATGATACGGTTCTTCATGCTATCAGAC 148609 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || | | | || | | | || | || ||||| | || || || ||| Sbjct 148610 CAGAGACCCATGTCAACAAGGTCCTTGAGCAACCAGGGGTTAACGACCTGGAACTCGCCA 148669 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | | || | |||| ||| || || || || || || | | |||||||| ||| Sbjct 148670 GCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTCATTGTTACCC 148729 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | || || | || || || |||||||| || ||||| || || || | | |||| Sbjct 148730 AGGATCTGGGATGTGCTGGCTGTGGGCATAGGGGCGACCAACAAGCTGTTGCGCACACCA 148789 Query 77259 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318 | | | |||||| || || || |||| ||||||||||| || || |||| | Sbjct 148790 TTTTGTTTGATTTGCTCCTTGAGGCTGGTCCAGTCCCAAAGATCCGATGGGGTGACATTC 148849 Query 77319 CAAAGATCGTATTGTAGAATTCCGTTACTAG-CATATGATCCATTATATGTTTCATAAGG 77377 || | |||||||| || || || | | || | || || | || || ||||| Sbjct 148850 CACATGTCGTATTGAAGGATGCCCTG-CGAGACGGGAGAACCTTCGTAGGTAGAGTAAGG 148908 Query 77378 TCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAA 77437 ||||| | ||| | || ||| ||| || | | || || || ||||| Sbjct 148909 GCCTTCAACCTTAGCAATCTCCATGGACGCAGTCAAGGCGGCATGGTAGATCGTCTCGAA 148968 Query 77438 AATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAA----AAGAA 77493 |||| ||| || | | | || || ||||| || | | || ||||| Sbjct 148969 GATCTGCTTGTTCAATTGTCTAGCCTCTGGCGACTCAAAGGGCATACGCAATGCCAAGAA 149028 Query 77494 TAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAA 77553 | | || || | |||||||| |||| ||||| || | |||| | | ||| Sbjct 149029 T----GTGTCAGCAAGACCCTGAACACCAAGGCCAATGGGACGGTGTCGCATGTTGCTGT 149084 Query 77554 TTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAA 77613 | || ||||| | || |||||||| | || || ||| | || | ||| ||| | Sbjct 149085 TGCGGGCCTCTGGGACGGGGTAATAATTGACATCAATGATTCTGTTCAAATTGTGAACGA 149144 Query 77614 CTACTT---TAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC--TATA----A 77664 | |||| ||||| | | | | || | || ||| | | || || |||| | Sbjct 149145 CGACTTGGGTAACCTCATGC---AACTTCTGGAAGTCATAAGTGCCTTCGTTATAGTCAA 149201 Query 77665 CAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCAT 77724 | || | ||| || | || |||| || || || || ||||||| || | || | Sbjct 149202 CGAAGGAGGGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGT 149261 Query 77725 ATTGTATTATCTCGGTACATAGATTACTACATTTGA-TAGTGCCCAGATTTTGTTGGTTG 77783 | | || |||||||| || ||||| | | | || |||| || ||||| | || || Sbjct 149262 ACTCGATGATCTCGGTGCAAAGATT-CGAGCTGCGAATAGTACCAAGATTCTTCTGATTA 149320 Query 77784 CTCTTTTTATTGCA-TGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842 ||||| ||||| ||| ||||| ||||| || || ||| | || || ||| |||| | Sbjct 149321 CTCTTGCGGTTGCAGTGA-TCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGC 149379 Query 77843 TTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCTCTCTC 77901 |||| ||| | | ||| | | ||| ||| || ||| | | || | |||| Sbjct 149380 CTCGAGAATGGCGTACCACA-GCTTCTGAGCCTTAATCTTCTGGCGGCCGCGACCCTCTG 149438 Query 77902 TTTCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGG 77959 ||| || | ||| | ||| || || ||||| || |||| ||| | | ||||| Sbjct 149439 CTTCGTACTTCTCGTACAGGGCC--TCGAACTCATCGCCATAAACGTCAGCTAGACCAGG 149496 Query 77960 GCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAG 78019 |||||| || || ||||| | | ||| || |||| | || ||| || ||||| ||||| Sbjct 149497 GCATTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAG 149556 Query 78020 ATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATT 78079 ||| || ||||| ||||| | || ||||| |||| | | ||| || || || || Sbjct 149557 ATCTGGGATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTT 149616 Query 78080 CTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCAT 78139 |||| |||||| || ||||| | || ||| || ||||| || || ||||| || || | Sbjct 149617 CTTTCGAAGATCAAGGAACTCAAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCGAA 149676 Query 78140 AACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCT 78199 | | ||||||| || || || |||||||||| ||||| || |||||||| | || | Sbjct 149677 AGCACCAGGTCTCTTGTTGCCACCCTGATCTACGTATCTTGCAGTGTTATTGAAGACACG 149736 Query 78200 CAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGC 78259 | ||| || | ||| ||||| || || || || || |||| ||| || ||| | || Sbjct 149737 TAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGC 149796 Query 78260 GCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACG 78319 || || |||| | || || || || |||||||| || || | || || Sbjct 149797 ACGGATGCGGTGAATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCACAGGT 149856 Query 78320 TTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 || | || || ||||||||||| || ||||| || |||||| | || || || Sbjct 149857 CTTGAGGGTGTCATAGATACCCTCAATGCTGTCGTCTTTCATGTCGACGAGGAAGCAAGA 149916 Query 78380 AGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439 || | || || ||||| ||||| || | || || || ||||| || || | Sbjct 149917 CGAGAGCTGGGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAAGCATGAGTGAAGTA 149976 Query 78440 TTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC----CCATTGATGAA 78495 ||| ||| | || ||||| || | ||| || || | || || |||| Sbjct 149977 TTTGCTAGACATGAGGTTGTAGGTCTGAATGACTTTCTCAACATCATCACCCCAGATG-- 150034 Query 78496 TTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTT 78555 || || || |||||||| | ||| ||||| ||||| || || |||| | | | | Sbjct 150035 --CCGACAGCCACACGCATGATCATGTGCTGTGGTCTCTCTACAATCTTGTCGTCGAGCT 150092 Query 78556 TCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCT 78613 ||| | ||| ||| |||| ||| || || || || || | ||| ||||| ||||| Sbjct 150093 TCAGTAGGTAAGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAA--TCTCT 150150 Query 78614 CTCGTAAATAATAACAGA 78631 || || | ||| |||| Sbjct 150151 GTCATAGACAATGGCAGA 150168 >seq15 Length=993015 Score = 114 bits (126), Expect = 2e-20 Identities = 238/350 (68%), Gaps = 7/350 (2%) Strand=Plus/Plus Query 48176 AATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATAT 48235 ||| | |||||| || || || ||||||||||| || ||||| || |||||||| || || Sbjct 219815 AATGAGTTCGTTGGAGAAGGTCAGACCGGGCATAAGACCACGCTTCTTGAGCCAGAAGAT 219874 Query 48236 TGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTC 48295 | ||||| | ||| ||||| || || || ||||| || || || |||| | || Sbjct 219875 GGAAGCGAAGGCTCCGCTGAAGAAGATACCCTCAACGGCGGCGAAGGCAATAAGACGCTG 219934 Query 48296 TCCGTAACTGG-CTTC--GTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTAC 48352 || | ||| |||| || | ||||| | | ||||| || |||||||| | Sbjct 219935 GGCGAAGGTGGACTTCTTGTCGGCAATCCAGTGCAGAGCCCAGTCGGCCTTCTTGCGGAT 219994 Query 48353 ACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGC--TATCTTTAACG 48410 ||||| || || || |||||||| ||||| | | | ||| || || || | | Sbjct 219995 GCAAGGAATGGTCTCAATAGCATTGAAGAG--ATGTGTCTTCTGGGCAGGCTCCTTGATG 220052 Query 48411 TAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAAT 48470 || || || || | ||| ||| | |||||||| || || || || ||||| || Sbjct 220053 TAGGTGTCAATGAGGAGAGAGTACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAG 220112 Query 48471 CCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTC 48520 ||||| || |||| || |||| |||||| ||||| | ||||||| || Sbjct 220113 CCGTAGAAGCATCGGGCCTCTGGGATCTGAACCTCACCAGAAAATCGCTC 220162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694666299192320