Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq51 264 2e-65 >seq51 Length=278824 Score = 264 bits (292), Expect = 2e-65 Identities = 636/951 (67%), Gaps = 20/951 (2%) Strand=Plus/Plus Query 76280 GATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCAT 76339 || |||| || || || || ||||||| || || || | || ||||| ||||| Sbjct 149222 GAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCGATGATCTCGGTGCAA 149281 Query 76340 AGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACA-TGAGTC 76398 ||||| | ||||| |||||||| | || || ||||| ||| || ||| || Sbjct 149282 AGATTCGAGCTGCGAATAGTACCAAGATTCTTCTGATTACTCTTGCGGTTGCAGTGA-TC 149340 Query 76399 CTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 76458 ||| ||||| | || ||| ||||||| ||| |||| | |||| ||| | | ||| | Sbjct 149341 CTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACA- 149399 Query 76459 GACTCT-AGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATA-TTGT-GTATATAA 76515 | ||| ||| || || | | || |||| ||| || || | ||| | Sbjct 149400 GCTTCTGAGCCTTAATCTTCTGGCGGCCGCGACCCTCTGCTTCGTACTTCTCGTACAGGG 149459 Query 76516 CCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAA 76575 || || || ||||| || |||| ||| | | |||||| ||||| || |||||||| | Sbjct 149460 CC--TCGAACTCATCGCCATAAACGTCAGCTAGACCAGGGCATTCGTTAGGACACATGAG 149517 Query 76576 TGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAAT 76635 | |||||| |||| | || ||| || ||||| |||||||| || ||||| ||||| | Sbjct 149518 GGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCTGGGATCCAGAGAGCCAG 149577 Query 76636 AAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTC 76695 || ||||| |||| | | ||| || || || |||||| |||||| |||||||| Sbjct 149578 GAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTC 149637 Query 76696 CATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACC 76755 | || ||| || ||||| || || ||||| || || | | |||| |||| || || || Sbjct 149638 AAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCGAAAGCACCAGGTCTCTTGTTGCC 149697 Query 76756 TCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTT 76815 |||||||||| ||||| ||||||||||| | || | | ||| || | ||||||||| Sbjct 149698 ACCCTGATCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGGTACAATGCCGTT 149757 Query 76816 AGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAG 76875 || || || || || |||| ||| || ||| ||||| || ||| || Sbjct 149758 CGAGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCGGTGAATGTTGAG 149817 Query 76876 GCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCC 76935 || || || || ||||| || ||||| | |||||| || | ||||||||||| || Sbjct 149818 ACCAATACCACCGGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATACC 149877 Query 76936 CTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGT 76995 ||| || || || || |||||| | || || || || | || || || Sbjct 149878 CTCAATGCTGTCGTCTTTCATGTCGACGAGGAAGCAAGACGAGAGCTGGGCCTGGGGTGT 149937 Query 76996 TCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTA 77055 ||| ||||| || | || || || ||||||||||| |||| ||| | || ||||| Sbjct 149938 TCCAGCATTGAAGAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAGACATGAGGTTGTA 149997 Query 77056 TGTTTCAATAACTGCTTCTATATC----CCATTGATGAATTCCTACAGCGACACGCATCA 77111 || | ||| ||| || | ||| || |||| || ||||| |||||||| | Sbjct 149998 GGTCTGAATGACTTTCTCAACATCATCACCCCAGATG----CCGACAGCCACACGCATGA 150053 Query 77112 ACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 77171 ||| ||||| |||| |||||| |||| | | | |||| | ||| ||| |||| Sbjct 150054 TCATGTGCTGTGGTCTCTCTACAATCTTGTCGTCGAGCTTCAGTAGGTAAGATCGCTCCA 150113 Query 77172 AAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAAT 77220 ||| || || || || || | ||| ||||| ||||| || || | ||| Sbjct 150114 GAGTCTTGAAGCCGAAGTATTGGTAGTTGAAA--TCTCTGTCATAGACAAT 150162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712931833436160