Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 5e-13 >seq6 Length=1299473 Score = 89.7 bits (98), Expect = 5e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || || ||||||||| ||| | || ||||| ||||||||||| ||||| Sbjct 1189168 ATGTAAGTGTCAATGAGTAGGGAGTAGGTCTCAGAGTGGATGTTCTCCATCATGATCTGG 1189227 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || || || | || || || || || ||||| ||| | || Sbjct 1189228 AAGCCGTAGAAGCAGCGAGCCTCAGGGATCTGGACCTCGCCGCTGAATCTTTCAACGAGG 1189287 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATG 17400 || ||||| |||||||| || |||||||| || ||||| || || Sbjct 1189288 TTCTCGTTGACGATGCCATCAGATGCGGCGAAGAAGGCCAAGATGTG 1189334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517524555302040