Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq6 89.7 5e-13
>seq6
Length=1299473
Score = 89.7 bits (98), Expect = 5e-13
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || || ||||||||| ||| | || ||||| ||||||||||| |||||
Sbjct 1189168 ATGTAAGTGTCAATGAGTAGGGAGTAGGTCTCAGAGTGGATGTTCTCCATCATGATCTGG 1189227
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| || || || | || || || || || ||||| ||| | ||
Sbjct 1189228 AAGCCGTAGAAGCAGCGAGCCTCAGGGATCTGGACCTCGCCGCTGAATCTTTCAACGAGG 1189287
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATG 17400
|| ||||| |||||||| || |||||||| || ||||| || ||
Sbjct 1189288 TTCTCGTTGACGATGCCATCAGATGCGGCGAAGAAGGCCAAGATGTG 1189334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517524555302040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |