Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq17 201 1e-46 >seq17 Length=588636 Score = 201 bits (222), Expect = 1e-46 Identities = 517/785 (66%), Gaps = 63/785 (8%) Strand=Plus/Plus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| | || | | ||| |||| ||||||| | | |||||||||| ||| | Sbjct 451985 CATCTTCATCGCAATTGTCTTGTGAGGGTCATAGCCCTTGATCACAAAGTCCTCTGCCTT 452044 Query 145605 GAAGTCATCTATG-TC-CTCCACCCGC-CTCAGGATCCTGAGC-CTGGGAAAGGGCCGGG 145660 || |||| ||| || |||| | | | | |||| ||| | ||||| || || Sbjct 452045 CCAGCCATCAATGCTCGCTCCCTTCTCGCGCGAGATCTCCAGCTCGGGGAACTCGC--GG 452102 Query 145661 GGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719 ||||| | || ||||||| || || | || ||||| | |||||||||||| || || Sbjct 452103 GGCTCGCGCTCTAGCTGGACGTTGAGCGCATCAACGTGATCGAGGTAGACGTGGGCATCG 452162 Query 145720 CCCAGGACGTGGATGAAG-TCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGT 145778 |||| |||||| ||| | | ||||| | | | | || || |||| ||||| || Sbjct 452163 CCCATAACGTGGGTGAGGCTTCCCGGAACCAACTCACA-GACATGCGCGAGCATGTGAGT 452221 Query 145779 CAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTG 145838 ||||| | ||||| || |||||||||||||| || || |||||||| | || ||||| Sbjct 452222 TAGCAGCGCATAGCTCGCAATGTTGAAGGGCACGCCGAGACCCATGTCGCAAGATCGCTG 452281 Query 145839 GTACAGCTGGCAGGAGAGCT---------------------CCCCG----------CCCG 145867 ||| ||||||||| || | | ||| |||| Sbjct 452282 GTAGAGCTGGCAGTGCAGGTGGCCCTGGGGCTTAGGCTCGTCACCGTTCTCTGAATCCCG 452341 Query 145868 CC-----------------ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 | |||||||||||| | | |||||||| |||||| |||| Sbjct 452342 CTTCTGGCGTGGGTATGAGACGTAGAACTGGGCAAACATATGGCAGGGTGGCAGGACCAT 452401 Query 145911 GGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCT 145970 ||||| |||||||||||||| ||||||| ||| | | | | ||||||| | Sbjct 452402 TTTCTTGAGGTCGGCCGGGTTCCAGGCTGTGAGGATGAGGCGGCGGTCGTAGGGGTTCGT 452461 Query 145971 CTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTT 146030 | | || || || || | |||||| || ||||| || ||| |||||||| Sbjct 452462 CCGCAGCTTATGGATGAGTTCGGCAATCTGGTCGACACCCTGTCCAGTGTAGTCTGTCTT 452521 Query 146031 GGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTC 146090 |||||| || ||| |||| || ||||| | ||||||||| |||||||| || || ||||| Sbjct 452522 GGAGTCAACATACTCGGCGCCAAAGTGTCGCCACTGGAAACCGTAGACAGGACCAAGGTC 452581 Query 146091 CCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTC 146150 || ||| | ||| ||| ||| | ||||||| || ||||| || || | || Sbjct 452582 ACCCTCCTCACGGTGAGTCAGGCCGAGGTTGTCGAGGAACTCGCGGGAGCCATTTCCATC 452641 Query 146151 CCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAAC 146208 ||||||||||| ||| |||||| || | | ||||| ||| || ||| ||| Sbjct 452642 CCAGATCTTGATGCCAGCCTCGCTAAGGGAT--TTGGATGAGGTGTTTGCCTCGATAAAC 452699 Query 146209 CAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA-- 146266 ||||| ||||| ||| ||| | | |||||| | ||||||||| || ||||||| Sbjct 452700 CAGAGGAGCTCGGCGATGACGGCTCGTGTGAAGACACGCTTGGTGGTGAGGAGGGGGAGG 452759 Query 146267 ACTGG 146271 ||||| Sbjct 452760 ACTGG 452764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590052806002120