Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq17 201 1e-46
>seq17
Length=588636
Score = 201 bits (222), Expect = 1e-46
Identities = 517/785 (66%), Gaps = 63/785 (8%)
Strand=Plus/Plus
Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604
||||| ||| | || | | ||| |||| ||||||| | | |||||||||| ||| |
Sbjct 451985 CATCTTCATCGCAATTGTCTTGTGAGGGTCATAGCCCTTGATCACAAAGTCCTCTGCCTT 452044
Query 145605 GAAGTCATCTATG-TC-CTCCACCCGC-CTCAGGATCCTGAGC-CTGGGAAAGGGCCGGG 145660
|| |||| ||| || |||| | | | | |||| ||| | ||||| || ||
Sbjct 452045 CCAGCCATCAATGCTCGCTCCCTTCTCGCGCGAGATCTCCAGCTCGGGGAACTCGC--GG 452102
Query 145661 GGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719
||||| | || ||||||| || || | || ||||| | |||||||||||| || ||
Sbjct 452103 GGCTCGCGCTCTAGCTGGACGTTGAGCGCATCAACGTGATCGAGGTAGACGTGGGCATCG 452162
Query 145720 CCCAGGACGTGGATGAAG-TCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGT 145778
|||| |||||| ||| | | ||||| | | | | || || |||| ||||| ||
Sbjct 452163 CCCATAACGTGGGTGAGGCTTCCCGGAACCAACTCACA-GACATGCGCGAGCATGTGAGT 452221
Query 145779 CAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTG 145838
||||| | ||||| || |||||||||||||| || || |||||||| | || |||||
Sbjct 452222 TAGCAGCGCATAGCTCGCAATGTTGAAGGGCACGCCGAGACCCATGTCGCAAGATCGCTG 452281
Query 145839 GTACAGCTGGCAGGAGAGCT---------------------CCCCG----------CCCG 145867
||| ||||||||| || | | ||| ||||
Sbjct 452282 GTAGAGCTGGCAGTGCAGGTGGCCCTGGGGCTTAGGCTCGTCACCGTTCTCTGAATCCCG 452341
Query 145868 CC-----------------ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910
| |||||||||||| | | |||||||| |||||| ||||
Sbjct 452342 CTTCTGGCGTGGGTATGAGACGTAGAACTGGGCAAACATATGGCAGGGTGGCAGGACCAT 452401
Query 145911 GGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCT 145970
||||| |||||||||||||| ||||||| ||| | | | | ||||||| |
Sbjct 452402 TTTCTTGAGGTCGGCCGGGTTCCAGGCTGTGAGGATGAGGCGGCGGTCGTAGGGGTTCGT 452461
Query 145971 CTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTT 146030
| | || || || || | |||||| || ||||| || ||| ||||||||
Sbjct 452462 CCGCAGCTTATGGATGAGTTCGGCAATCTGGTCGACACCCTGTCCAGTGTAGTCTGTCTT 452521
Query 146031 GGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTC 146090
|||||| || ||| |||| || ||||| | ||||||||| |||||||| || || |||||
Sbjct 452522 GGAGTCAACATACTCGGCGCCAAAGTGTCGCCACTGGAAACCGTAGACAGGACCAAGGTC 452581
Query 146091 CCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTC 146150
|| ||| | ||| ||| ||| | ||||||| || ||||| || || | ||
Sbjct 452582 ACCCTCCTCACGGTGAGTCAGGCCGAGGTTGTCGAGGAACTCGCGGGAGCCATTTCCATC 452641
Query 146151 CCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAAC 146208
||||||||||| ||| |||||| || | | ||||| ||| || ||| |||
Sbjct 452642 CCAGATCTTGATGCCAGCCTCGCTAAGGGAT--TTGGATGAGGTGTTTGCCTCGATAAAC 452699
Query 146209 CAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA-- 146266
||||| ||||| ||| ||| | | |||||| | ||||||||| || |||||||
Sbjct 452700 CAGAGGAGCTCGGCGATGACGGCTCGTGTGAAGACACGCTTGGTGGTGAGGAGGGGGAGG 452759
Query 146267 ACTGG 146271
|||||
Sbjct 452760 ACTGG 452764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590052806002120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |