Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1388 118 9e-22 seq3070 114 1e-20 seq8 96.9 3e-15 >seq1388 Length=1638 Score = 118 bits (130), Expect = 9e-22 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | |||||| | |||| ||||||||||| || ||||| ||||| | Sbjct 1302 TTCCACCGCGGAGACGGAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 1361 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || || |||| || ||||| ||||| || | ||||| | ||||||||| || Sbjct 1362 AAAGAGTACGGCCGTCTTCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCCGGGG 1421 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| |||||| || || | ||| || || | |||| Sbjct 1422 GAATACCTTCCTTGTCCTGGATCTTGGTCTTGACATTCTCGATGGTGTCGGAAGACTCCA 1481 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181 ||| | ||||| |||||||| ||||| ||||| ||||| || ||||| |||| Sbjct 1482 CTTCGAGAGTAATAGTCTTGCCTGTTAAGGTTTTAACAAAGATCTGCATACTGAA 1536 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | |||||| | |||| ||||||||||| || || || ||||| | Sbjct 1074 TTCCACCGCGGAGACGGAGCACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCGG 1133 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || | |||| || ||||| ||||| || |||| |||| ||||||||| || Sbjct 1134 AAAGAGTGCGACCGTCTTCGAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCCGGGG 1193 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGT-TTCACCTGGCCGACAGTATCACCGGGCTCC 21125 | | ||||||||||| || ||| || || || | ||| ||| || || ||| Sbjct 1194 GAATACCTTCCTTGTC-CTGAATTTTGGTCTTAACGTTCTCGATAGTGTCGGAGGACTCA 1252 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | || |||||||| |||||||| || ||||| || || |||||| Sbjct 1253 ACTTCAAGAGTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCATT 1303 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | |||||||||||| ||||| |||||||| ||||| | ||||| || | ||| Sbjct 545 AGTACGAGATGCAAAGTGGATTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCC 604 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || || || || || || | ||||| | ||||| ||| ||| | ||||||||||| Sbjct 605 TCGAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCCGGGGGGATACCTTCCTTGTCT 664 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||| ||||| | ||| |||||| || || ||| | ||||||||| Sbjct 665 TGAATCTTAGTCTTCACGTTCTCGATGGTATCAGAGGATTCGACTTCAAGAGTAATGGTC 724 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || || || | || |||||||| || |||||| Sbjct 725 TTTCCAGTAAGAGTCTTGACAAAAATCTGCATT 757 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | |||||| | ||| | ||| ||||| || || ||||| || || | Sbjct 300 TTCCACCACGTAGACGGAGCACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCGG 359 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||||| | ||||||| ||||| || || || | || || | ||||||||| | Sbjct 360 AGAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAG 419 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGT-TTCACCTGGCCGACAGTATCACCGGGCTCC 21125 | | ||||||||||| || ||| || ||||| | | | ||||| || ||| Sbjct 420 GAATACCTTCCTTGTC-CTGAATTTTAGTCTTCACATTCTCAATGGTATCCGAGGATTCC 478 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | ||| || ||||| || || | ||||| || ||||||||||| Sbjct 479 ACTTCAAGGGTGATCGTCTTACCAGTCAGAGTTTTCACGAATATTTGCAT 528 >seq3070 Length=537 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | ||| | ||| |||||||| |||||||| ||||| | | Sbjct 251 CCACCACGAAGACGGAGCACAAGATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAC 192 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | |||||||| || || |||||| | || || | |||||| ||| || Sbjct 191 AGAGTGCGGTCATCCTCCAGTTGCTTTCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGA 132 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||| ||||| | || || |||| | ||| | Sbjct 131 ATTCCTTCCTTGTCCTGAATCTTGGTCTTCACATTGCTGATGCTATCGGATGACTCTACT 72 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | || || ||||| ||||||| ||||||||| || || ||||| ||| Sbjct 71 TCGAGAGTGATAGTCTTTCCGGTTAGCGTTTTGACGAAGATCTGCATCTTG 21 >seq8 Length=1068389 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | |||||||||||| || ||||| ||||| | Sbjct 631326 CCACCACGGAGGCGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 631267 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | |||||||||| ||| Sbjct 631266 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 631207 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || |||||| ||||| | | ||| |||||| || ||| Sbjct 631206 ATGCCCTCCTTATCCTGGATCTTCGACTTCACGTTGTCGATAGTATCCGAGGACTCGACC 631147 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| |||||||| || || Sbjct 631146 TCAAGGGTGATGGTCTTTCCCGT 631124 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| |||||||| ||||| | ||||| || | ||||| ||||| ||||| Sbjct 631578 GTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 631519 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || | | |||||||||| ||| | || ||||| || |||||| || Sbjct 631518 GCAAAGATCAAGCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTCGACTTG 631459 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| ||| ||| | |||| || | ||| |||||||||||||| | || Sbjct 631458 ACATTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 631399 Query 21159 TTGAC 21163 ||||| Sbjct 631398 TTGAC 631394 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | || |||||||| || ||||| || || | Sbjct 632064 CCGCCACGAAGACGGAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGCTC 632005 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||||||||| || || ||| | ||||||| ||||||||| ||| Sbjct 632004 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGA 631945 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| ||||| | | ||| ||||| | || ||| Sbjct 631944 ATGCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGCTGGACTCGACC 631885 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| ||||| | || || || || || ||||| Sbjct 631884 TCAAGAGTGATCGTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCAT 631838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422242459138148