Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq8 143 2e-29
seq19 127 2e-24
seq1388 122 8e-23
seq3070 104 2e-17
seq15 100 2e-16
>seq8
Length=1068389
Score = 143 bits (158), Expect = 2e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | |||||||| || || |||||||||||||||| ||||| ||||||
Sbjct 632046 ACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCATCCTCC 631987
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || ||||| |||| || |||||||| ||||| || |||||||||||||| |
Sbjct 631986 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 631927
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||| || || ||||||||| | || | ||| ||
Sbjct 631926 ATCTTCGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATCGTCTTT 631867
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||| || || || || ||||||||
Sbjct 631866 CCGGTCAGGGTCTTCACGAAGATCTGCAT 631838
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | ||||||||||| || |||||||| || || || || ||||||
Sbjct 631818 ACCAGGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTTCGACCATCCTCA 631759
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||| ||| ||||||| ||||||||||| || || |||||||||||||| |
Sbjct 631758 AGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGA 631699
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||| || | ||| ||||||| ||| | || ||
Sbjct 631698 ATCTTCGACTTGACGTTGTCGATGGTATCAGATGACTCCACCTCGAGGGTGATAGTCTTA 631639
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || ||||| ||||||||
Sbjct 631638 CCGGTGAGGGTCTTGACAAAGATCTGCAT 631610
Score = 98.7 bits (108), Expect = 9e-16
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||| | ||||| |||||||||||
Sbjct 631303 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 631244
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||||||||| |||| ||||||||||| || || || ||||||||||| || || ||
Sbjct 631243 CTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTT 631184
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| || |||| | ||||||||| | ||| | || || || ||
Sbjct 631183 CGACTTCACGTTGTCGATAGTATCCGAGGACTCGACCTCAAGGGTGATGGTCTTTCCCGT 631124
Query 118715 CA 118716
||
Sbjct 631123 CA 631122
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| |||||||| || ||||||||||| ||| | ||||| |||||| |||||
Sbjct 631585 GTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTG 631526
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| ||||| |||| | |||||||| || || || || |||||||| || || ||
Sbjct 631525 CTTGCCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTT 631466
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||| | ||| ||||||| ||| | || ||||||||
Sbjct 631465 CGACTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 631406
Query 118715 CAGAGTTTTTAC 118726
|| || || ||
Sbjct 631405 GAGGGTCTTGAC 631394
>seq19
Length=502728
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || ||| || || |||||||| ||||||| |||||| ||||||
Sbjct 172591 CACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTC 172650
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || ||||| |||| || |||||||| || || || ||||||||||||||
Sbjct 172651 GAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 172710
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||| | ||| ||||| | ||| | ||| ||
Sbjct 172711 GATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTT 172770
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || || ||||||||
Sbjct 172771 CCCCGTGAGGGTCTTGACGAAGATCTGCAT 172800
>seq1388
Length=1638
Score = 122 bits (134), Expect = 8e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
||||||||||| || |||||||||||| | ||||| ||||| ||||| || |||
Sbjct 332 GTAGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGACCGTCCTCAAGCTGCTTACCA 391
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||||||||| ||||| || ||||| || || |||||||| |||||| ||
Sbjct 392 GCGAAGATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGAATTTTAGTCTTC 451
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||| |||| | || || || | ||| | ||| || || |||||||||
Sbjct 452 ACATTCTCAATGGTATCCGAGGATTCCACTTCAAGGGTGATCGTCTTACCAGTCAGAGTT 511
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || || |||||
Sbjct 512 TTCACGAATATTTGCAT 528
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | ||||||||||| || |||||||||||| | |||||| |||||
Sbjct 91 CACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCCTC 150
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || ||| |||||||||||||||| || || || ||||| ||||| ||
Sbjct 151 GAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTG 210
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | || | ||||| | | || ||||| | || | || ||
Sbjct 211 AATCTTAGTCTTGACGTTCTCAATAGTGTCGGAGGATTCCACCTCAAGAGTAATGGTCTT 270
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || |||||||||||
Sbjct 271 TCCAGTAAGGGTCTTCACGAAAATCTGCAT 300
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || || || ||||||||||| || | ||||| ||||||||| || ||||||
Sbjct 560 GTGGATTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGTTGCTTTCCA 619
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| ||||| |||||||| || || || || ||||||||| ||| || ||
Sbjct 620 GCGAAGATAAGACGTTGCTGATCCGGGGGGATACCTTCCTTGTCTTGAATCTTAGTCTTC 679
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||| || | | ||||| || | || | || || || || |||||
Sbjct 680 ACGTTCTCGATGGTATCAGAGGATTCGACTTCAAGAGTAATGGTCTTTCCAGTAAGAGTC 739
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||||||||||||
Sbjct 740 TTGACAAAAATCTGCAT 756
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
||||| || ||||| |||||||| || || ||||| ||||| || || || |||
Sbjct 788 GTAGATTCCTTTTGGATGTTGTAGTCAGACAGGGTGCGACCGTCCTCAAGTTGCTTACCA 847
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||||||||||||||| || || || ||||| ||||| || ||| || ||
Sbjct 848 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGAATCTTAGTCTTC 907
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | | ||| || || | || | || || ||||| | ||
Sbjct 908 ACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGAGTGATGGTCTTTCCGGTTAAGGTC 967
Query 118722 TTTACAAAAATCTGCAT 118738
|| || |||||||||||
Sbjct 968 TTGACGAAAATCTGCAT 984
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | || ||||| || || || ||||| ||| | |||||| || ||
Sbjct 1093 CACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCGTCTTC 1152
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || |||||| | ||||| || ||||| || || || || || ||||||||
Sbjct 1153 GAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCCGGGGGAATACCTTCCTTGTCCTG 1212
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|||||| ||||| | |||| ||||| | | ||| || || | || | || ||
Sbjct 1213 AATTTTGGTCTTAACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGAGTGATGGTCTT 1272
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| | || || || |||||||||||
Sbjct 1273 TCCGGTTAAGGTCTTGACGAAAATCTGCAT 1302
>seq3070
Length=537
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || ||||||||||| ||| || |||||| |||||| || || |||||
Sbjct 221 GTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGTCATCCTCCAGTTGCTTTCCC 162
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| ||||||| ||||||||||| ||||| || || |||||||| ||| || ||
Sbjct 161 GCAAAGATGAGGCGCTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGAATCTTGGTCTTC 102
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | | || | ||| || |||| || | || || ||||| || |||
Sbjct 101 ACATTGCTGATGCTATCGGATGACTCTACTTCGAGAGTGATAGTCTTTCCGGTTAGCGTT 42
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 41 TTGACGAAGATCTGCAT 25
>seq15
Length=666898
Score = 100 bits (110), Expect = 2e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| | |||||| |||||| ||||| || |||||| ||||
Sbjct 143564 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 143505
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| |||||||| || || || |||||||||||||| || || || || | ||
Sbjct 143504 AGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 143445
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| |||||||| | ||||||||| | ||| | || ||||| || || || || || |||
Sbjct 143444 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAA 143385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433813200387076
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