Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq5 158 3e-33
seq15 127 4e-24
>seq5
Length=1316942
Score = 158 bits (174), Expect = 3e-33
Identities = 629/966 (65%), Gaps = 38/966 (4%)
Strand=Plus/Plus
Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841
|| ||| |||||||| || | | || || | ||| | | ||| | |||||| ||
Sbjct 713613 CTCGACTCCGCGATTGTGTATGACCGCGACTTCAACTACCAATACTTCGGTTTCAAGACT 713672
Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901
|||||| ||| ||||||||||| ||||| |||||||| || || ||| |||||||||
Sbjct 713673 CTGGAGCGATCTTATCTCCTCAAGATTGACGGCAAGATTGTTGAGCGACCGCAGCACATG 713732
Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTAC 248961
| ||||| ||| |||| || || |||||||| ||| | || || ||||| |||
Sbjct 713733 ATCATGCGTGTGTCTGTTGGCATCTGGGGCGATGACATTGAGCGTGTCCTGGAGACCTAC 713792
Query 248962 ACCGGAATG-AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTA- 249019
| | ||| | | ||| | | || ||||| | || || || |||||||| ||||
Sbjct 713793 AACCTCATGTCCAGCAAGCT-GTTTACCCATGCTTCGCCCACCCTTTTCAACGCTGGTAC 713851
Query 249020 CCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACG 249079
|| ||| | |||||| || ||||| || ||| |||| | || || |||| |
Sbjct 713852 CCCTCAGC-CCCAGCTGTCTTCCTGCTTCCTGGTTGACATGAAGGAGGATAGCATCGAGG 713910
Query 249080 GCATTTATGACACGCTTAAACAGACG---GCGAAGATTTCTAAATTCGCGGGCGGAATCG 249136
| || |||||||| || | ||||| || | ||| || || | || ||||| ||||
Sbjct 713911 GTATCTATGACACTCTCA---AGACGTGTGCCATGATCTCCAAGATGGCTGGCGGTATCG 713967
Query 249137 GTCTCTCCGTCTC-CAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTC 249195
||||| || ||| | ||||| || | || || ||||| ||||| || || |
Sbjct 713968 GTCTCAACG-CTCACCGTATCCGTGCCACTGGCTCTTACATTGCCGGTACCAACGGTACC 714026
Query 249196 AGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAG 249255
| ||| || | ||| | || || ||| | ||| || | | | || |||||
Sbjct 714027 TCCAACGGTGTCATTCCCATGCTCCGTGTCTTCAACAACACTGCTCGATACGTCGACCAG 714086
Query 249256 GCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATA 249312
| || | ||| ||| | |||||||| || | || |||||||| ||| |
Sbjct 714087 GGTGGCAACAAGCGACCGGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGCGGATGTC 714146
Query 249313 TTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTC 249372
|| |||||||||||| || |||||| ||||||| || | | || || || ||
Sbjct 714147 TTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCCCGCGATCTT 714206
Query 249373 TTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGG 249432
||| | ||| ||| || | || | |||||| || || || |||||||||||
Sbjct 714207 TTCCTAGCCCTTTGGATCCCTGATCTCTTCATGAAGCGGGTTGAGAAGAACGGCGATTGG 714266
Query 249433 ACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATCTAC-ACGGCGCCGACTTCGA 249491
|| || | | || ||| ||| | ||| ||| || | |||||| || ||||
Sbjct 714267 ACTCTGATGTGCCCCAACGAGTGCCCTGGCCTTGCCGA-CTGCTACGGCGAGGAGTTCG- 714324
Query 249492 CCAAGCC-TATA--AGAAATAC--GAATC----CAACGGCATCGGCAAGACAATCAAGGC 249542
| ||| |||| |||| ||| ||| | ||| || || ||||||| || |||||
Sbjct 714325 --AGGCCTTATACGAGAAGTACGAGAAGCTTGGCAAGGG--TC-GCAAGACCATGAAGGC 714379
Query 249543 TCGGACCCTTTTTGCGAAG--GTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTATTAT 249600
|| || || || | | | | ||| | || | ||||| || || | | ||
Sbjct 714380 TCAGA--AGTTGTGGTACGCCATCCTCGAGGCTCAAACTGAGACCGGCAACCCCT-TCAT 714436
Query 249601 -TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCATCTTGGTACCATCCGCTC 249659
||| ||| ||||| |||||| |||||| ||||| | | || || |||||||||
Sbjct 714437 GCTGTACAAGGACGCATGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGCAG 714496
Query 249660 GTCAAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGGAGGAGATTGCCGTCTGCAA 249719
|| || ||||| | ||| | ||| | |||| || || ||| | || ||||| ||
Sbjct 714497 CTCCAACCTCTGCACTGAGATCATTGAGTACTGTGCCCCTGATGAGGTCGCTGTCTGTAA 714556
Query 249720 CCTGGC 249725
||| ||
Sbjct 714557 CCTTGC 714562
>seq15
Length=666898
Score = 127 bits (140), Expect = 4e-24
Identities = 266/399 (67%), Gaps = 22/399 (6%)
Strand=Plus/Minus
Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060
||||| || |||| ||| |||| || ||||| ||||| ||||| || || |||| |||
Sbjct 460208 CTTCCGCACATGCTCTTCTACGGACCCCCCGGTACAGGAAAGACCTCTACAGTCCTCGCG 460149
Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120
|||| | || | || || | || | | || ||||||||||| ||||||
Sbjct 460148 TTGGCAAAAGAGCTCTACGGACCGGAGTTGATTAAAACACGAGTGCTCGAGCTCAACGCT 460089
Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCG 254180
|| ||||| || || | | ||||||| |||||| |||||| ||| || |||
Sbjct 460088 TCCGACGAGCGTGGCATCTCCATCGTCCGAGACAAGGTCAAGAACTTCGCCCGCATGC-- 460031
Query 254181 ATTTCGTCGTTCCAACC--CGGCT------------------GTCCGCCTTTCAAGCTCG 254220
| || | ||| ||| ||||| | ||||| || || ||
Sbjct 460030 AATTGACCAATCCGACCGCCGGCTACAAAGACAAATACCCCTGCCCGCCATTTAAAATCA 459971
Query 254221 TGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGA 254280
| ||||| |||||||| || |||||||| || |||||| ||||| || |||| |
Sbjct 459970 TCATCCTCGACGAGGCCGATTCCATGACGCAAGATGCGCAGAGTGCCCTGCGAAGAACAA 459911
Query 254281 TGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCA 254340
|||||||| || | | || || || ||| || | |||||||||||| | ||||
Sbjct 459910 TGGAGACGTACAGCAAGATCACTCGGTTCTGCTTGATTTGCAACTACGTGACCCGTATCA 459851
Query 254341 TCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
||| |||||| ||| ||| ||| ||||||||||||||
Sbjct 459850 TCGACCCGCTCGCTAGTCGATGCAGCAAGTTTCGATTCA 459812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073721646423104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |