Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq1388 113 3e-20
>seq1388
Length=1638
Score = 113 bits (124), Expect = 3e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
|||||| || || ||||| || |||||||||||| || | | |||| || | ||
Sbjct 325 ATGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGACCGTCCTCAAGCTG 384
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279
|| |||||| | || | |||||| ||||| ||||| ||||| ||||| ||||||
Sbjct 385 CTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGAATTTT 444
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
|||| ||| | || |||||||| ||| || || | ||| || || ||||| ||
Sbjct 445 AGTCTTCACATTCTCAATGGTATCCGAGGATTCCACTTCAAGGGTGATCGTCTTACCAGT 504
Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364
||||||||| || || |||||||||
Sbjct 505 CAGAGTTTTCACGAATATTTGCATA 529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362164841066073
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |