Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq17 136 3e-27 >seq17 Length=588636 Score = 136 bits (150), Expect = 3e-27 Identities = 134/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||||||| ||| ||||| || || ||||||||| ||| | ||| || ||| | | | Sbjct 348902 GCGCTCGAGGATGAGCTGGGCAATGCGGTCGCCCTCCTTGATCTCAAAGTCGGCCTCGGC 348843 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | ||||||||||| ||| || | ||| |||||||||||||| || ||||||||||| Sbjct 348842 GTGGTTGAACAGCAGCACCTTGACCTGGCCACGGTAGTCGGCGTCAATGACGCCCGCGCC 348783 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 | ||||||||||| |||| ||| || ||||||||||| || | |||||||| Sbjct 348782 CGTGTCGATGAAGTTCTTGGACGCAAGTCCGGAGCGGGGGGCAATGCGGCCGT 348730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430037350090136