Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq45 100 4e-17
seq6 95.1 2e-15
>seq45
Length=299451
Score = 100 bits (110), Expect = 4e-17
Identities = 83/99 (84%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 284927 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATCACCAAGCCCGCCAT 284985
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||| ||||| || |||||||| || ||||||||| ||||
Sbjct 284986 CCGACGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTC 285024
Score = 93.3 bits (102), Expect = 7e-15
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 16541 TATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600
|| || |||| || | |||| | |||| ||||||| || || |||| ||| || ||
Sbjct 285089 TACGAGGAGACCCGCGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTC 285148
Query 16601 CACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTG 16660
||| ||||||||||| || || ||||| |||||||| | || | ||||||||| |
Sbjct 285149 ACCTACACCGAGCACGCCAAGCGGAAGACCGTCACCTCGCTCGACGTTGTCTATGCACTC 285208
Query 16661 AAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| || |||||||||| | ||||| || || |||||
Sbjct 285209 AAGCGACAAGGCCGTACCCTCTATGGCTTCGGTGGTTAA 285247
>seq6
Length=1299473
Score = 95.1 bits (104), Expect = 2e-15
Identities = 83/101 (82%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || ||||| || || || ||||| || |||||
Sbjct 889177 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATTACCAAACCCGCTAT 889235
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| ||||||||||| || ||||||||| | ||||
Sbjct 889236 CCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATTTCTG 889276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79072225759329
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |