Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq45 100 4e-17 seq6 95.1 2e-15 >seq45 Length=299451 Score = 100 bits (110), Expect = 4e-17 Identities = 83/99 (84%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| || ||||||||||| || || Sbjct 284927 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATCACCAAGCCCGCCAT 284985 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| || |||||||| || ||||||||| |||| Sbjct 284986 CCGACGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTC 285024 Score = 93.3 bits (102), Expect = 7e-15 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 16541 TATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600 || || |||| || | |||| | |||| ||||||| || || |||| ||| || || Sbjct 285089 TACGAGGAGACCCGCGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTC 285148 Query 16601 CACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTG 16660 ||| ||||||||||| || || ||||| |||||||| | || | ||||||||| | Sbjct 285149 ACCTACACCGAGCACGCCAAGCGGAAGACCGTCACCTCGCTCGACGTTGTCTATGCACTC 285208 Query 16661 AAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || || |||||||||| | ||||| || || ||||| Sbjct 285209 AAGCGACAAGGCCGTACCCTCTATGGCTTCGGTGGTTAA 285247 >seq6 Length=1299473 Score = 95.1 bits (104), Expect = 2e-15 Identities = 83/101 (82%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || ||||| || || || ||||| || ||||| Sbjct 889177 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATTACCAAACCCGCTAT 889235 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| ||||||||||| || ||||||||| | |||| Sbjct 889236 CCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATTTCTG 889276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072225759329