Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq5 89.7 5e-13
>seq5
Length=1316942
Score = 89.7 bits (98), Expect = 5e-13
Identities = 328/500 (66%), Gaps = 23/500 (5%)
Strand=Plus/Minus
Query 148250 CTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAACCGGGACA 148309
|||||| || ||||| | | ||||||| || | ||| ||||| ||| | || || ||
Sbjct 714347 CTCGTACTTCTCGTATAAGGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGGCCAGGGCA 714288
Query 148310 CTCGTCGGGGCACATCAATGACC-ATTTCCCTCCTGTCTTTACCCTCTTCATAAACAGAT 148368
||||| ||||||||||| | || || || | || ||| |||| |||||| || ||||
Sbjct 714287 CTCGTTGGGGCACATCAGAGTCCAATCGCCGTTCT-TCTCAACCCGCTTCATGAAGAGAT 714229
Query 148369 CAGGTGTCCACATGGCAAAAAGAAGATCGCGAGC-----CTTCATATCCTCGGCACCCAT 148423
|||| |||| | ||| | | ||||||||| || | || |||| | | |
Sbjct 714228 CAGGGATCCAAAGGGCTAGGAAAAGATCGCGGGCGCGGACCTC--TTCCTTGCCGTGGTT 714171
Query 148424 ATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGTATACGGT 148483
|||||| || |||| || || || || |||||||| ||||||| ||| | ||
Sbjct 714170 CTTGCGC---AGGTCCAGGAACTCGAAGACATCCGCGTGCCAGGGCTCGAGGTAGATGGC 714114
Query 148484 CATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGCA-TGCTATTAAAAA 148539
| || || | | | || || || || ||||| | || |||| || | || || |
Sbjct 714113 GAAAGCACCCGGTCGCTTGTTGCCACCCTGGTCGACGTATCG-AGCAGTGTTGTTGAAGA 714055
Query 148540 CACGCAATGCA-GGTCCCAATCCCGCCGCA-GTTCCGTTTGTGGATTCAATTTTACTATT 148597
|||| | ||| || | ||| | | || ||||| || |||| | |
Sbjct 714054 CACGGA--GCATGGGAATGACACCGTTGGAGGTACCGTTGGTACCGGCAATGTAAGAGCC 713997
Query 148598 GGTGGCGCGAATTTGAGTGA-CATTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGG 148656
||||| || || | |||| | || || ||||| ||||| | || || |||||||
Sbjct 713996 AGTGGCACGGATACG-GTGAGCGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGG 713938
Query 148657 CACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGT 148716
|||| ||||| || | |||||| || | || || ||||| | |||| || ||||
Sbjct 713937 CACACGTCTTGAGAGTGTCATAGATACCCTCGATGCTATCCTCCTTCATGTCAACCAGGA 713878
Query 148717 AGCACGATGACATTTGAGGC 148736
|||| || |||| || |||
Sbjct 713877 AGCAGGAAGACAGCTGGGGC 713858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478642936390160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |