Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5 363 4e-95
>seq5
Length=1316942
Score = 363 bits (402), Expect = 4e-95
Identities = 1071/1632 (66%), Gaps = 38/1632 (2%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || || || |||| || | | ||| ||||| || | | | || ||| |||||||
Sbjct 713814 TTTACCCATGCTTCGCCCACCCTTTTCAACGCTGGTACCCCTCAGCCCCAGCTGTCTTCC 713873
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | |||||||| ||| |||||||||||||| |||||| || ||||
Sbjct 713874 TGCTTCCTGGTTGACATGAAGGAGGATAGCATCGAGGGTATCTATGACACTCTCAAGACG 713933
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
||||| | || ||||||| || ||||| || ||| | | || || || | | |||||
Sbjct 713934 TGTGCCATGATCTCCAAGATGGCTGGCGGTATCGGTCTCAACGCTC-ACCGTATCCGTGC 713992
Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
|| | | ||||||| ||| || || ||| || || | |||||||||| |
Sbjct 713993 CACTGG-CTCTTACATTGCCGGTACCAACGGTACCTCCAACGGTGTCATTCCCATGCTCC 714051
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
|||| || |||| ||||| | ||||||||||||||||| ||||| || || |
Sbjct 714052 GTGTCTTCAACAACACTGCTCGATACGTCGACCAGGGTGGCAACAAGCGACCGGGTGCTT 714111
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
| || || || |||||||| || || ||| | || ||||| || || || || || |
Sbjct 714112 TCGCCATCTACCTCGAGCCCTGGCACGCGGATGTCTTCGAGTTCCTGGACCTGCGCAAGA 714171
Query 363905 AC-ACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTG 363961
|| |||| || |||||| | || || || ||||| ||| || |||||| | |||
Sbjct 714172 ACCACGGCAAGGAAGAGG---TCCGCGCCCGCGATCTTTTCCTAGCCCTTTGGATCCCTG 714228
Query 363962 ACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGA 364019
| | || |||||||| || ||| | | | | ||||| | || | ||||| ||||
Sbjct 714229 ATCTCTTCATGAAGCGGGTTGAG--AAGAACGGCGATTGGACTCTGATGTGCCCCAACGA 714286
Query 364020 ATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079
|| || || ||| |||| | || || || | | || ||||||| ||||| ||
Sbjct 714287 GTGCCCTGGCCTTGCCGACTGCTACGGCGAGGAGTTCGAGGCCTTATACGAGAAGTACGA 714346
Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139
| || |||| ||| ||||| || || |||||| | |||| |||||| | ||
Sbjct 714347 GAAGCTTGGCAAGGGTCGCAAGACCATGAAGGCTCAGAAGTTGTGGTACGCCATCCTCGA 714406
Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199
| || | |||||| || | |||| ||| ||||||| || | ||||||||||||
Sbjct 714407 GGCTCAAACTGAGACCGGCAACCCCTTCATGCTGTACAAGGACGCATGCAACCGCAAGAG 714466
Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAAT 364258
||||||| || |||| || || | || |||| |||||| || || ||||| ||||| |
Sbjct 714467 CAACCAGAAGAACCTGGGCACCA-TCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGT 714525
Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG 364318
|| || || || ||| || || ||||||||||| || | || || || ||||||
Sbjct 714526 ACTGTGCCCCTGATGAGGTCGCTGTCTGTAACCTTGCCTCCCTGGCTCTGCCTTCGTTTG 714585
Query 364319 T------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGC 364370
| || || || | ||| | || | || | || || ||| | || |
Sbjct 714586 TCGACTACAACGAGGGCTGCTACGACTTCAAGAAGCTGCACGAAGTCACCCAGGTCGTTG 714645
Query 364371 TACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG--- 364426
| | |||| | ||||| | |||||| || | || || | ||| || ||
Sbjct 714646 TCC--GCAACTTGAACAAGATCATCGACGTCAACCACTACCCCGTCATTGAGGCTCGCAA 714703
Query 364427 -AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTT 364485
||| || ||||| || | || ||||| ||||||| ||||| || || || |
Sbjct 714704 CAGC-----AACATGCGCCACAGACCCATTGGCGTTGGTGTCCAGGGTCTTGCCGATGCC 714758
Query 364486 TTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATC 364545
|| | || ||| | || || || ||||| ||||||| || || ||| ||||
Sbjct 714759 TTCCTCGCTCTTCGCATGCCCTTCGAGTCCCCTGAGGCTCGTGAGCTGAACAAGCAGATA 714818
Query 364546 TTTGAAACAATGTATTTTGCCGCAATGACTG-CTTCGTGTGATTTGGCAAAAACCAAGGG 364604
||||| || || || || || |||||| || |||| | | ||| | | ||||
Sbjct 714819 TTTGAGACCATCTACCACGCTGCCCTGACTGCCTCCGTGCAGCTCGCCAAGGAGC-AGGG 714877
Query 364605 AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATG 364664
||||| || | | |||| || || ||| |||| | | |||||||| | ||
Sbjct 714878 CCCCTACTCCACCTTTAAGGGCTCTCCCGCTTCTGAGGGCATCCTTCAGTTTGACATGTG 714937
Query 364665 GAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724
||| || | ||| |||| || ||| ||||||| || || ||| | || ||| ||||
Sbjct 714938 GAACGTGAAGCCCTCTGACCTTTGGGACTGGGAGACTCTCCGTGAGCAGGTCAAGGAGCA 714997
Query 364725 TGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784
||| ||||||| | | | || |||||||| ||||| |||| | ||||||||
Sbjct 714998 TGGCCTTCGCAACAGCTTGCTCCTCGCCCCCATGCCTACGGCCAGTACTTCGCAGATCCT 715057
Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844
|| |||||||| ||||| || || | ||| || |||| ||||| || || |
Sbjct 715058 AGGCAACAACGAATGCTTTGAGCCCTATACCTCAAACATTTACCAGCGCCGTGTCCTGGC 715117
Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904
|| || || | ||| || || | || ||||||| || ||| || ||||
Sbjct 715118 TGGTGAGTTCCAGGTTGTCAACCCCTGGCTCCTCAAGGACCTAGTCGATATGGGCTTGTG 715177
Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG 364964
| ||| |||||||||| ||||| |||| |||||| | ||| |||| ||
Sbjct 715178 GTCTGATGCCATGAAGAACCGAATCATTGCCGAGGGTGGTTCCATCCAGGACATCCCCAA 715237
Query 364965 ATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCT 365024
|||| | ||| | ||| || | ||||| || || ||||| |||||| ||| |
Sbjct 715238 CATTCCCGCTGATATCAAGTCTCTGTACAAGACTGTGTGGGAGATTTCCCAGCGTCAAGT 715297
Query 365025 CATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATT 365084
||| | ||| | ||||| || ||||| || || |||| |||||| | ||| |
Sbjct 715298 CATCCAGATGTCTGCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCCCTCAACATCCA 715357
Query 365085 CATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGG 365144
||||| | || ||| | ||| |||| |||||| || || ||||| |||
Sbjct 715358 CATGAAGGACCCTACCATGGGTAAGATTACCAGCATGCACTTTGCTGGCTGGAAGCTCGG 715417
Query 365145 TCTTAAGACAGG 365156
||| ||||| ||
Sbjct 715418 TCTCAAGACTGG 715429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303299277443846
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |