Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 363 4e-95 >seq5 Length=1316942 Score = 363 bits (402), Expect = 4e-95 Identities = 1071/1632 (66%), Gaps = 38/1632 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || || || |||| || | | ||| ||||| || | | | || ||| ||||||| Sbjct 713814 TTTACCCATGCTTCGCCCACCCTTTTCAACGCTGGTACCCCTCAGCCCCAGCTGTCTTCC 713873 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| ||| |||||||||||||| |||||| || |||| Sbjct 713874 TGCTTCCTGGTTGACATGAAGGAGGATAGCATCGAGGGTATCTATGACACTCTCAAGACG 713933 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | || ||||||| || ||||| || ||| | | || || || | | ||||| Sbjct 713934 TGTGCCATGATCTCCAAGATGGCTGGCGGTATCGGTCTCAACGCTC-ACCGTATCCGTGC 713992 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | | ||||||| ||| || || ||| || || | |||||||||| | Sbjct 713993 CACTGG-CTCTTACATTGCCGGTACCAACGGTACCTCCAACGGTGTCATTCCCATGCTCC 714051 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 |||| || |||| ||||| | ||||||||||||||||| ||||| || || | Sbjct 714052 GTGTCTTCAACAACACTGCTCGATACGTCGACCAGGGTGGCAACAAGCGACCGGGTGCTT 714111 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 | || || || |||||||| || || ||| | || ||||| || || || || || | Sbjct 714112 TCGCCATCTACCTCGAGCCCTGGCACGCGGATGTCTTCGAGTTCCTGGACCTGCGCAAGA 714171 Query 363905 AC-ACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTG 363961 || |||| || |||||| | || || || ||||| ||| || |||||| | ||| Sbjct 714172 ACCACGGCAAGGAAGAGG---TCCGCGCCCGCGATCTTTTCCTAGCCCTTTGGATCCCTG 714228 Query 363962 ACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGA 364019 | | || |||||||| || ||| | | | | ||||| | || | ||||| |||| Sbjct 714229 ATCTCTTCATGAAGCGGGTTGAG--AAGAACGGCGATTGGACTCTGATGTGCCCCAACGA 714286 Query 364020 ATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079 || || || ||| |||| | || || || | | || ||||||| ||||| || Sbjct 714287 GTGCCCTGGCCTTGCCGACTGCTACGGCGAGGAGTTCGAGGCCTTATACGAGAAGTACGA 714346 Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139 | || |||| ||| ||||| || || |||||| | |||| |||||| | || Sbjct 714347 GAAGCTTGGCAAGGGTCGCAAGACCATGAAGGCTCAGAAGTTGTGGTACGCCATCCTCGA 714406 Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199 | || | |||||| || | |||| ||| ||||||| || | |||||||||||| Sbjct 714407 GGCTCAAACTGAGACCGGCAACCCCTTCATGCTGTACAAGGACGCATGCAACCGCAAGAG 714466 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAAT 364258 ||||||| || |||| || || | || |||| |||||| || || ||||| ||||| | Sbjct 714467 CAACCAGAAGAACCTGGGCACCA-TCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGT 714525 Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG 364318 || || || || ||| || || ||||||||||| || | || || || |||||| Sbjct 714526 ACTGTGCCCCTGATGAGGTCGCTGTCTGTAACCTTGCCTCCCTGGCTCTGCCTTCGTTTG 714585 Query 364319 T------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGC 364370 | || || || | ||| | || | || | || || ||| | || | Sbjct 714586 TCGACTACAACGAGGGCTGCTACGACTTCAAGAAGCTGCACGAAGTCACCCAGGTCGTTG 714645 Query 364371 TACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG--- 364426 | | |||| | ||||| | |||||| || | || || | ||| || || Sbjct 714646 TCC--GCAACTTGAACAAGATCATCGACGTCAACCACTACCCCGTCATTGAGGCTCGCAA 714703 Query 364427 -AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTT 364485 ||| || ||||| || | || ||||| ||||||| ||||| || || || | Sbjct 714704 CAGC-----AACATGCGCCACAGACCCATTGGCGTTGGTGTCCAGGGTCTTGCCGATGCC 714758 Query 364486 TTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATC 364545 || | || ||| | || || || ||||| ||||||| || || ||| |||| Sbjct 714759 TTCCTCGCTCTTCGCATGCCCTTCGAGTCCCCTGAGGCTCGTGAGCTGAACAAGCAGATA 714818 Query 364546 TTTGAAACAATGTATTTTGCCGCAATGACTG-CTTCGTGTGATTTGGCAAAAACCAAGGG 364604 ||||| || || || || || |||||| || |||| | | ||| | | |||| Sbjct 714819 TTTGAGACCATCTACCACGCTGCCCTGACTGCCTCCGTGCAGCTCGCCAAGGAGC-AGGG 714877 Query 364605 AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATG 364664 ||||| || | | |||| || || ||| |||| | | |||||||| | || Sbjct 714878 CCCCTACTCCACCTTTAAGGGCTCTCCCGCTTCTGAGGGCATCCTTCAGTTTGACATGTG 714937 Query 364665 GAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724 ||| || | ||| |||| || ||| ||||||| || || ||| | || ||| |||| Sbjct 714938 GAACGTGAAGCCCTCTGACCTTTGGGACTGGGAGACTCTCCGTGAGCAGGTCAAGGAGCA 714997 Query 364725 TGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784 ||| ||||||| | | | || |||||||| ||||| |||| | |||||||| Sbjct 714998 TGGCCTTCGCAACAGCTTGCTCCTCGCCCCCATGCCTACGGCCAGTACTTCGCAGATCCT 715057 Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844 || |||||||| ||||| || || | ||| || |||| ||||| || || | Sbjct 715058 AGGCAACAACGAATGCTTTGAGCCCTATACCTCAAACATTTACCAGCGCCGTGTCCTGGC 715117 Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904 || || || | ||| || || | || ||||||| || ||| || |||| Sbjct 715118 TGGTGAGTTCCAGGTTGTCAACCCCTGGCTCCTCAAGGACCTAGTCGATATGGGCTTGTG 715177 Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG 364964 | ||| |||||||||| ||||| |||| |||||| | ||| |||| || Sbjct 715178 GTCTGATGCCATGAAGAACCGAATCATTGCCGAGGGTGGTTCCATCCAGGACATCCCCAA 715237 Query 364965 ATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCT 365024 |||| | ||| | ||| || | ||||| || || ||||| |||||| ||| | Sbjct 715238 CATTCCCGCTGATATCAAGTCTCTGTACAAGACTGTGTGGGAGATTTCCCAGCGTCAAGT 715297 Query 365025 CATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATT 365084 ||| | ||| | ||||| || ||||| || || |||| |||||| | ||| | Sbjct 715298 CATCCAGATGTCTGCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCCCTCAACATCCA 715357 Query 365085 CATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGG 365144 ||||| | || ||| | ||| |||| |||||| || || ||||| ||| Sbjct 715358 CATGAAGGACCCTACCATGGGTAAGATTACCAGCATGCACTTTGCTGGCTGGAAGCTCGG 715417 Query 365145 TCTTAAGACAGG 365156 ||| ||||| || Sbjct 715418 TCTCAAGACTGG 715429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303299277443846