Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1388 140 3e-28
seq3070 122 8e-23
seq8 122 8e-23
seq6 109 5e-19
seq19 107 2e-18
seq15 95.1 1e-14
>seq1388
Length=1638
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | ||||||||| | ||| | || || |||||||| |||||||| || |
Sbjct 758 CCGCCGCGAAGACGCAGCACGAGATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 817
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| || ||||| || ||| |||| | ||||||||||||||| |||
Sbjct 818 AGGGTGCGACCGTCCTCAAGTTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 877
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || || || ||| | | ||| | ||| |||| |||||| |
Sbjct 878 ATGCCTTCCTTATCCTGAATCTTAGTCTTCACGTTCTCGATAGTGTCGGAGGACTCAACT 937
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||||| || || ||||||||||||||
Sbjct 938 TCAAGAGTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCAT 984
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| ||||| | || | || ||||| || || ||||||||||||
Sbjct 74 CCACCACGCAGACGAAGCACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAA 133
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || ||| |||| | ||||||||||||||| |||
Sbjct 134 AGAGTGCGACCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 193
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || || || ||||| | ||| | ||| |||| ||| || |
Sbjct 194 ATGCCTTCCTTATCCTGAATCTTAGTCTTGACGTTCTCAATAGTGTCGGAGGATTCCACC 253
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||| || || || || || || ||||||||||||||
Sbjct 254 TCAAGAGTAATGGTCTTTCCAGTAAGGGTCTTCACGAAAATCTGCAT 300
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| | ||| | || ||||| || || ||||||||||||
Sbjct 302 CCACCACGTAGACGGAGCACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAG 361
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| |||||||| || ||| |||| | ||| ||||||||||||||
Sbjct 362 AGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGA 421
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||||| ||| | | ||| | ||||| | ||| || |
Sbjct 422 ATACCTTCCTTGTCCTGAATTTTAGTCTTCACATTCTCAATGGTATCCGAGGATTCCACT 481
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || ||||| || |||||||| ||||| || |||||
Sbjct 482 TCAAGGGTGATCGTCTTACCAGTCAGAGTTTTCACGAATATTTGCAT 528
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| ||||| | || | ||| |||||||| || || ||||| |||
Sbjct 1076 CCACCGCGGAGACGGAGCACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCGGAA 1135
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||| || ||||||||||| ||| | || | || ||||||||||| ||
Sbjct 1136 AGAGTGCGACCGTCTTCGAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCCGGGGGA 1195
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||||| ||| | | ||| | ||| |||| |||||| |
Sbjct 1196 ATACCTTCCTTGTCCTGAATTTTGGTCTTAACGTTCTCGATAGTGTCGGAGGACTCAACT 1255
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||||| || || ||||||||||||||
Sbjct 1256 TCAAGAGTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCAT 1302
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| ||||| | || | ||| |||||||| || |||||||| ||
Sbjct 1304 CCACCGCGGAGACGGAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1363
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||| || ||||||||||| ||| |||| | ||| ||||||||||| ||
Sbjct 1364 AGAGTACGGCCGTCTTCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCCGGGGGA 1423
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | ||| | || |||| ||||| |
Sbjct 1424 ATACCTTCCTTGTCCTGGATCTTGGTCTTGACATTCTCGATGGTGTCGGAAGACTCCACT 1483
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| || || || |||| ||||| || || ||||||||
Sbjct 1484 TCGAGAGTAATAGTCTTGCCTGTTAAGGTTTTAACAAAGATCTGCAT 1530
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| ||||| || || || | ||| | || || ||||| ||||||||||| ||
Sbjct 530 CCACCACGCAAGCGAAGTACGAGATGCAAAGTGGATTCCTTCTGAATGTTGTAGTCAGAA 589
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| || ||||| || ||| |||| | ||| ||||| ||||| |||
Sbjct 590 AGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCCGGGGGG 649
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || || ||| | | ||| | ||||| | ||| ||||
Sbjct 650 ATACCTTCCTTGTCTTGAATCTTAGTCTTCACGTTCTCGATGGTATCAGAGGATTCGACT 709
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||| || || || ||||| || || |||||||||||
Sbjct 710 TCAAGAGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTGCAT 756
>seq3070
Length=537
Score = 122 bits (134), Expect = 8e-23
Identities = 166/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| | ||||| || |||||||| ||||||||||| ||| |
Sbjct 251 CCACCACGAAGACGGAGCACAAGATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAC 192
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| || ||||| || || |||| | |||||||| ||||||||
Sbjct 191 AGAGTGCGGTCATCCTCCAGTTGCTTTCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGA 132
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGA----GCTGCTCCACAGTATCGGTGGACTC 131183
|||||||| ||||| || || ||| | |||| | | |||||| |||||
Sbjct 131 ATTCCTTCCTTGTCCTGAATCTTGGTCTTCACATTGCTGATGC----TATCGGATGACTC 76
Query 131184 GATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
| |||| || | || || |||||||| ||||| ||||| ||||||||
Sbjct 75 TACTTCGAGAGTGATAGTCTTTCCGGTTAGCGTTTTGACGAAGATCTGCAT 25
>seq8
Length=1068389
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| || || | || | ||| |||||||| || |||||||||||||||
Sbjct 632064 CCGCCACGAAGACGGAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGCTC 632005
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| |||||||| || || |||| | ||||||||||| || ||
Sbjct 632004 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGA 631945
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || ||| ||| | | || | |||||| |||||||||
Sbjct 631944 ATGCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGCTGGACTCGACC 631885
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || ||||| || || || ||||| ||||||||
Sbjct 631884 TCAAGAGTGATCGTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCAT 631838
Score = 113 bits (124), Expect = 4e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | || | ||| |||||||| ||||||||||| |||
Sbjct 631608 CCACCACGAAGGCGGAGGACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAG 631549
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| || |||| || |||||||||||||| ||
Sbjct 631548 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGA 631489
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| ||| ||||| | || | ||| || | ||||| |
Sbjct 631488 ATACCCTCCTTATCCTGGATCTTCGACTTGACATTGTCGATAGTGTCAGAAGACTCCACC 631429
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|||| ||| | ||| || ||||| || || || ||||
Sbjct 631428 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGA 631392
Score = 105 bits (116), Expect = 6e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| || |||||||| ||| | |||||| |||||| |||||||| ||
Sbjct 631296 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCA 631237
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| |||| | ||||||||||||||| ||||| || || || || ||| ||| |||
Sbjct 631236 GCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTCGACTTC 631177
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210
| | || | |||||| | |||||||| || | ||| | ||| || || ||
Sbjct 631176 ACGTTGTCGATAGTATCCGAGGACTCGACCTCAAGGGTGATGGTCTTTCCCGT 631124
>seq6
Length=1299473
Score = 109 bits (120), Expect = 5e-19
Identities = 341/515 (66%), Gaps = 15/515 (3%)
Strand=Plus/Minus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146
|| ||| | || ||||| | |||||||| || ||||||| | || | || |
Sbjct 1189065 CCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGGTGGATCCAGGACAAGGACTCGTCC 1189006
Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206
|| ||| |||| |||| |||||||| ||| ||||| |||| || || |||
Sbjct 1189005 TTTGCCCAGCGCCTGGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTT 1188946
Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266
|| ||||||| | |||| | ||| ||||||| |||||||| || |||||||
Sbjct 1188945 GCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAACGAG 1188886
Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACACTCG 46325
||||| || || || |||||||| || || ||||| || || || || | || |||
Sbjct 1188885 CTGATTTCTCGTGATGAGGGCCTTCACACTGACTTCGCCTGCCTGCTCC----ACTCTCA 1188830
Query 46326 CGTGCA-CGACAAGCTTGCGCCCGACACCGT-GCTGAGCATGTTCAAGGAGGCGGTGGCC 46383
|| | | | ||| || | | | | | || ||| ||| || || || ||
Sbjct 1188829 TCTGAAGGGTCGTGCTAGC-AAGAAGATCATCGAAGA-CATCATCACTGATGCCGTCACC 1188772
Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAG 46443
|| ||||||||||| | || | || |||||| |||||||| ||||||||| | |
Sbjct 1188771 ATCGAGAAGGAGTTCCTCACCGAGGCTCTGCCCTGCGCCCTGCTCGGCATGAACTCTGAC 1188712
Query 46444 TCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT-TCACCAGC- 46501
||| | ||||| ||||| || || || || || || || ||| || || |
Sbjct 1188711 CTCATGAAGCAGTACATTGAGTTCGTTGCCGATCGTCT--TCTTGTCGCTCTCGGCAACG 1188654
Query 46502 CGAAGCATTTTCACG-CGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGC 46560
|||| | | || | || ||| || || || || ||| | ||||||||||| | |||
Sbjct 1188653 AGAAG-GTCTACAAGTCGACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGC 1188595
Query 46561 AAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|| || || || ||||| ||||| ||||| || ||
Sbjct 1188594 AAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 1188560
>seq19
Length=502728
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || ||||| || || | || |||||| || |||||||| ||||||
Sbjct 172574 CCACCACGGAGGCGGAGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 172633
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| |||||||| || || |||| | |||||||||||||| |||
Sbjct 172634 AGAGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGG 172693
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 172694 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 172753
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || || || || || ||||| ||||||||
Sbjct 172754 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 172800
>seq15
Length=666898
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | ||||| ||||| ||||||||||| ||| |||
Sbjct 143566 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 143507
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | |||||||||||||| ||||| || || ||||| ||| || ||||| | |
Sbjct 143506 TCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 143447
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||||| || | ||| | ||| || || || || || || ||||
Sbjct 143446 CAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 143387
Query 131225 AA 131226
||
Sbjct 143386 AA 143385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471993606779520
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