Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq5 389 7e-103
seq6 275 1e-68
>seq5
Length=1316942
Score = 389 bits (430), Expect = 7e-103
Identities = 1123/1711 (66%), Gaps = 63/1711 (4%)
Strand=Plus/Minus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||||| ||| ||| | || |||| ||| | |||||||||||||| |||||||| |
Sbjct 715476 TGAACTGGATGGGAGCGGCAGCAGCCTGGGTGCGTAGGTAGTACATGCCAGTCTTGAGAC 715417
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
| |||| | | ||||||| || | ||| ||| | | ||
Sbjct 715416 CGAGCTTCCAGCCAGCAAAGTGCATGCTGGTAATCTTACCCATGGTAGG---------GT 715366
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920
||| || || ||||||||||||| ||| || | ||||| | || || || |
Sbjct 715365 CCTT---CATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAG 715309
Query 243921 CCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980
||| ||||| | ||| || ||||| || | |||||||| | | ||||| |
Sbjct 715308 ACATCTGGATGACTTGACGCTGGGAAATCTCCCACACAGTCTTGTACAGAGACTTGATAT 715249
Query 243981 GCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCA 244040
|||| | ||||| ||| | || || | | | |||| || | ||
Sbjct 715248 CAGCGGGAATGTTGGGGATGTCCTGGATGGAACCACCCTCGGCAATGATTCGGTTCTTCA 715189
Query 244041 TGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCACC 244096
|| ||| ||||| ||||| | || | || ||| || || ||| | || ||
Sbjct 715188 TGGCATCAGACCACAAGCCCATATCGA-CTAGGTCCTTGA---GGAGCCAGGGGTTGACA 715133
Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156
||||| ||||| || | ||| || ||||||||||| | ||| | | ||||| | |
Sbjct 715132 ACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAAATGTTTGAGGTATAGGGCTCAAAG 715073
Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216
| || ||||||| || ||||||| || || || || |||||||| | | ||||
Sbjct 715072 CATTCGTTGTTGCCTAGGATCTGCGAAGTACTGGCCGTAGGCATGGGGGCGAGGAGCAAG 715013
Query 244217 CTGTTCCTCACGCCGTGCCTCTGGA--TGCGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274
||||| | | ||| ||| || || ||| | ||| || | ||||||||| | |
Sbjct 715012 CTGTTGCGAAGGCCATGCTCCTTGACCTGCTCACGGAGAG-TC-TCCCAGTCCCAAAGGT 714955
Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA--C 244332
| ||||| | || |||| ||||||||||||||| || | |||| | || |
Sbjct 714954 C--AGAGGGCTTCACGTT-------CCACATGTCAAACTGAAGGATGCCCT--CAGAAGC 714906
Query 244333 GGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGT 244391
||| ||||| |||| | |||||| || | || ||| |||| || | ||
Sbjct 714905 GGGAGAGCCCTTAAAGGTGGAGTAGGGGCCCTGCTCCTTGGCGAGCTGCACGGAGGCAGT 714846
Query 244392 CGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGC 244451
| ||||| |||| |||||||||||| || ||| |||||||| || || |||| |
Sbjct 714845 C-AGGGCAGCGTGGTAGATGGTCTCAAATATCTGCTTGTTCAGCTCACGAGCCTCAGGGG 714787
Query 244452 AGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGA 244511
| |||||| |||| | | |||| | ||||| || ||||| || || | ||| |
Sbjct 714786 ACTCGAAGGGCATGCGAAGAGCGAGGAAGGCATCGGCAAGACCCTGGACACCAACGCCAA 714727
Query 244512 TGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGA 244571
|||||||||| ||| ||||| | || || |||||||| |||| ||||||
Sbjct 714726 TGGGTCTGTGGCGCATGTTGCTGTTGCGAGCCTCAATGACGGGGTAGTGGTTGACGTCGA 714667
Query 244572 TCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGT 244631
| | |||||| | ||||||| | | || ||| ||| |||| || |||||||
Sbjct 714666 TGATCTTGTTCAAGTTGCGGACAACGACCTGGGTGACTTCGTGCAGCTTCTTGAAGTCGT 714607
Query 244632 ACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCA 244691
| | || ||||| | || || |||||| || || | | ||| |
Sbjct 714606 A---GCAGC---CCTCG----TTGTAGTCG--ACAAACGAAGGCAGAGCCAGGGAGGCAA 714559
Query 244692 GGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTAC 244751
|||| ||||| || ||||| || | | ||||| | ||||| |||||||||||
Sbjct 714558 GGTTACAGACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCAGAGGTTGG 714499
Query 244752 TGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGA 244811
|| |||||||||||||| || || ||| |||| |||||| ||||||||||| |
Sbjct 714498 AGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCATGCGTCCTTGTACA 714439
Query 244812 GCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAG 244871
|||||||||| |||||||| || || |||||| | || ||| | | | ||
Sbjct 714438 GCATGAAGGGGTTGCCGGTCTCAGTTTGAGCCTCGAGGATGGCGTACCACAACTTCTGAG 714379
Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931
|||| | ||| ||||| ||||||| |||||| ||| | |||||||||||
Sbjct 714378 CCTTCATGGTCTTGCGACCCTTGCCAAGCTTCTCGTACTTCTCGTATAAGGCCTCGAACT 714319
Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991
| ||| || ||| | ||||| |||||| |||||||| ||| |||| ||||
Sbjct 714318 CCTCGCCGTAGCAGTCGGCAAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAATCGC 714259
Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051
|| | || |||| || ||||||||| || |||||||| ||||| |||| || || |
Sbjct 714258 CGTTCTTCTCAACCCGCTTCATGAAGAGATCAGGGATCCAAAGGGCTAGGAAAAGATCGC 714199
Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111
|| | ||| ||| ||| |||||| | ||| |||| || || ||||| ||
Sbjct 714198 GGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAGACATCCG 714139
Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171
||||||||||||| | ||||| |||| || || || ||||||||||| |||||||| |
Sbjct 714138 CGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCGGTCGCTTGTTGCCACCCTGGTCGA 714079
Query 245172 CCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGG 245227
| | |||||| |||||||| || || | || | | ||||| |||
Sbjct 714078 ----CGTATCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGACACCGTTGGAGGTA 714023
Query 245228 CCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG--AGGTTGCTGATGGACATGCCTA 245285
|||||||| || ||||| | ||| || | | | | | || | || | || |
Sbjct 714022 CCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATACGGTGAGCGTTGAGA--CCGA 713965
Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345
||||| || ||||||||| | ||| || |||||| ||||| || ||||| |
Sbjct 713964 TACCGCCAGCCATCTTGGAGATCATGGCACACGTCTTGAGAGTGTCATAGATACCCTCGA 713905
Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405
|||| ||| |||||||| | ||| |||||||| ||||||||||||| ||| | | |
Sbjct 713904 TGCTATCCTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGGGGCTGAGGGGTACCAG 713845
Query 245406 AGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436
|||||| || ||||| || ||||||||
Sbjct 713844 CGTTGAAAAGGGTGGGCGAAGCATGGGTAAA 713814
>seq6
Length=1299473
Score = 275 bits (304), Expect = 1e-68
Identities = 607/911 (67%), Gaps = 77/911 (8%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| || ||||||||||| |||
Sbjct 1189454 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAGGAGATTGATCTG 1189395
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCA----CTGTCTGAGAACGAAAAGTTTTTCCTCAA 42415
| ||||| | | | | ||| | ||| ||| ||||| |||| ||| ||
Sbjct 1189394 TCGAAGGA-TCTTCACGATTGGAACAACCGCCTGACTGCCGACGAACAGTTCTTCGTCTC 1189336
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| |||||||||||||||| ||||| ||||| ||||| |||||||| | ||
Sbjct 1189335 TCACATCTTGGCCTTCTTCGCCGCATCTGATGGCATCGTCAACGAGAACCTCGTTGAAAG 1189276
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| ||| | |||||| ||||||||||||||||||||||| ||
Sbjct 1189275 ATTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 1189216
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595
|||||| | ||||||||| ||| || ||| | |||| |||||| ||| |||
Sbjct 1189215 GGAGAACATCCACTCTGAGACCTACTCCCTACTCATTGACACTTACATCAAGGAGCCCTC 1189156
Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGA-------TGCC-------------C 42635
|||| | | || ||||| ||||| ||||| | | || |
Sbjct 1189155 TCAGCGCACCTACCTCTTCAACGCCATTGAGACCAGTATGTTTTCCCAGTCCCACAAAAC 1189096
Query 42636 TGCAT-----CAA----------------------------GAAGAAGGCGGACTGGGCG 42662
||||| ||| |||||||| ||||||||
Sbjct 1189095 TGCATGCACACAAACTAATCGACCATAGTTCCCTGCATCCGAAAGAAGGCTGACTGGGCC 1189036
Query 42663 CTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722
|| |||||| || ||| | | || | | || | ||||| |||||| | ||
Sbjct 1189035 ATCCGGTGGATCCAGGACAAGGACTCGTCCTTTGCCCAGCGCCTGGTTGCCTTTGCTGCT 1188976
Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGT 42781
|| ||||| ||||||||| || ||||| || |||||||||||||||||| || ||
Sbjct 1188975 GTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGC 1188916
Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841
|| ||||| || || |||||||| ||||| || || | || ||||| || || |
Sbjct 1188915 CTC-ATGCCTGGCCTGACCTTCTCCAACGAGCTGATTTCTCGTGATGAGGGCCTTCACAC 1188857
Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCT-CAGGCACAAGCCCTCGAAGGAGCGGG 42900
||||| |||||||| || ||| || || ||| | || | ||| ||
Sbjct 1188856 TGACTTCGCCTGCCTGCTCCACTC---TCATCTGAAGGGTCGTGCTAGC-AAGAAGATCA 1188801
Query 42901 TCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGC 42960
|| | ||||||||| || ||||| |||||||||||||||||||| || | ||||
Sbjct 1188800 TCGAAGACATCATCACTGATGCCGTCACCATCGAGAAGGAGTTCCTCACCGAGGCTCTGC 1188741
Query 42961 CCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCG 43020
|| ||||| ||||||||||| ||||||||| ||||||| ||| ||| ||||
Sbjct 1188740 CCTGCGCCCTGCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTTGCCG 1188681
Query 43021 ACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAACACGCCGTGCCCCT 43074
| | ||| || || | | |||| || || ||||||| || | |||||
Sbjct 1188680 ATCGTCTTCT-TG-----TCGCTCTCGGCAACGAGAAGGTCTACAAGTCGACCAACCCCT 1188627
Query 43075 TCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCG 43134
||||||| |||||||||||||| | | |||||||||||||| ||||||||||| ||||
Sbjct 1188626 TCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCG 1188567
Query 43135 CCGACTACCAG 43145
|||||||||
Sbjct 1188566 GTGACTACCAG 1188556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944300800807280
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