Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq5 389 7e-103 seq6 275 1e-68 >seq5 Length=1316942 Score = 389 bits (430), Expect = 7e-103 Identities = 1123/1711 (66%), Gaps = 63/1711 (4%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| ||| ||| | || |||| ||| | |||||||||||||| |||||||| | Sbjct 715476 TGAACTGGATGGGAGCGGCAGCAGCCTGGGTGCGTAGGTAGTACATGCCAGTCTTGAGAC 715417 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | |||| | | ||||||| || | ||| ||| | | || Sbjct 715416 CGAGCTTCCAGCCAGCAAAGTGCATGCTGGTAATCTTACCCATGGTAGG---------GT 715366 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 ||| || || ||||||||||||| ||| || | ||||| | || || || | Sbjct 715365 CCTT---CATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAG 715309 Query 243921 CCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980 ||| ||||| | ||| || ||||| || | |||||||| | | ||||| | Sbjct 715308 ACATCTGGATGACTTGACGCTGGGAAATCTCCCACACAGTCTTGTACAGAGACTTGATAT 715249 Query 243981 GCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCA 244040 |||| | ||||| ||| | || || | | | |||| || | || Sbjct 715248 CAGCGGGAATGTTGGGGATGTCCTGGATGGAACCACCCTCGGCAATGATTCGGTTCTTCA 715189 Query 244041 TGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCACC 244096 || ||| ||||| ||||| | || | || ||| || || ||| | || || Sbjct 715188 TGGCATCAGACCACAAGCCCATATCGA-CTAGGTCCTTGA---GGAGCCAGGGGTTGACA 715133 Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 ||||| ||||| || | ||| || ||||||||||| | ||| | | ||||| | | Sbjct 715132 ACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAAATGTTTGAGGTATAGGGCTCAAAG 715073 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 | || ||||||| || ||||||| || || || || |||||||| | | |||| Sbjct 715072 CATTCGTTGTTGCCTAGGATCTGCGAAGTACTGGCCGTAGGCATGGGGGCGAGGAGCAAG 715013 Query 244217 CTGTTCCTCACGCCGTGCCTCTGGA--TGCGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274 ||||| | | ||| ||| || || ||| | ||| || | ||||||||| | | Sbjct 715012 CTGTTGCGAAGGCCATGCTCCTTGACCTGCTCACGGAGAG-TC-TCCCAGTCCCAAAGGT 714955 Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA--C 244332 | ||||| | || |||| ||||||||||||||| || | |||| | || | Sbjct 714954 C--AGAGGGCTTCACGTT-------CCACATGTCAAACTGAAGGATGCCCT--CAGAAGC 714906 Query 244333 GGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGT 244391 ||| ||||| |||| | |||||| || | || ||| |||| || | || Sbjct 714905 GGGAGAGCCCTTAAAGGTGGAGTAGGGGCCCTGCTCCTTGGCGAGCTGCACGGAGGCAGT 714846 Query 244392 CGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGC 244451 | ||||| |||| |||||||||||| || ||| |||||||| || || |||| | Sbjct 714845 C-AGGGCAGCGTGGTAGATGGTCTCAAATATCTGCTTGTTCAGCTCACGAGCCTCAGGGG 714787 Query 244452 AGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGA 244511 | |||||| |||| | | |||| | ||||| || ||||| || || | ||| | Sbjct 714786 ACTCGAAGGGCATGCGAAGAGCGAGGAAGGCATCGGCAAGACCCTGGACACCAACGCCAA 714727 Query 244512 TGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGA 244571 |||||||||| ||| ||||| | || || |||||||| |||| |||||| Sbjct 714726 TGGGTCTGTGGCGCATGTTGCTGTTGCGAGCCTCAATGACGGGGTAGTGGTTGACGTCGA 714667 Query 244572 TCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGT 244631 | | |||||| | ||||||| | | || ||| ||| |||| || ||||||| Sbjct 714666 TGATCTTGTTCAAGTTGCGGACAACGACCTGGGTGACTTCGTGCAGCTTCTTGAAGTCGT 714607 Query 244632 ACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCA 244691 | | || ||||| | || || |||||| || || | | ||| | Sbjct 714606 A---GCAGC---CCTCG----TTGTAGTCG--ACAAACGAAGGCAGAGCCAGGGAGGCAA 714559 Query 244692 GGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTAC 244751 |||| ||||| || ||||| || | | ||||| | ||||| ||||||||||| Sbjct 714558 GGTTACAGACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCAGAGGTTGG 714499 Query 244752 TGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGA 244811 || |||||||||||||| || || ||| |||| |||||| ||||||||||| | Sbjct 714498 AGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCATGCGTCCTTGTACA 714439 Query 244812 GCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAG 244871 |||||||||| |||||||| || || |||||| | || ||| | | | || Sbjct 714438 GCATGAAGGGGTTGCCGGTCTCAGTTTGAGCCTCGAGGATGGCGTACCACAACTTCTGAG 714379 Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931 |||| | ||| ||||| ||||||| |||||| ||| | ||||||||||| Sbjct 714378 CCTTCATGGTCTTGCGACCCTTGCCAAGCTTCTCGTACTTCTCGTATAAGGCCTCGAACT 714319 Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991 | ||| || ||| | ||||| |||||| |||||||| ||| |||| |||| Sbjct 714318 CCTCGCCGTAGCAGTCGGCAAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAATCGC 714259 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 || | || |||| || ||||||||| || |||||||| ||||| |||| || || | Sbjct 714258 CGTTCTTCTCAACCCGCTTCATGAAGAGATCAGGGATCCAAAGGGCTAGGAAAAGATCGC 714199 Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 || | ||| ||| ||| |||||| | ||| |||| || || ||||| || Sbjct 714198 GGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAAGACATCCG 714139 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171 ||||||||||||| | ||||| |||| || || || ||||||||||| |||||||| | Sbjct 714138 CGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCGGTCGCTTGTTGCCACCCTGGTCGA 714079 Query 245172 CCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGG 245227 | | |||||| |||||||| || || | || | | ||||| ||| Sbjct 714078 ----CGTATCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGACACCGTTGGAGGTA 714023 Query 245228 CCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG--AGGTTGCTGATGGACATGCCTA 245285 |||||||| || ||||| | ||| || | | | | | || | || | || | Sbjct 714022 CCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATACGGTGAGCGTTGAGA--CCGA 713965 Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345 ||||| || ||||||||| | ||| || |||||| ||||| || ||||| | Sbjct 713964 TACCGCCAGCCATCTTGGAGATCATGGCACACGTCTTGAGAGTGTCATAGATACCCTCGA 713905 Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405 |||| ||| |||||||| | ||| |||||||| ||||||||||||| ||| | | | Sbjct 713904 TGCTATCCTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGGGGCTGAGGGGTACCAG 713845 Query 245406 AGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436 |||||| || ||||| || |||||||| Sbjct 713844 CGTTGAAAAGGGTGGGCGAAGCATGGGTAAA 713814 >seq6 Length=1299473 Score = 275 bits (304), Expect = 1e-68 Identities = 607/911 (67%), Gaps = 77/911 (8%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| || ||||||||||| ||| Sbjct 1189454 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAGGAGATTGATCTG 1189395 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCA----CTGTCTGAGAACGAAAAGTTTTTCCTCAA 42415 | ||||| | | | | ||| | ||| ||| ||||| |||| ||| || Sbjct 1189394 TCGAAGGA-TCTTCACGATTGGAACAACCGCCTGACTGCCGACGAACAGTTCTTCGTCTC 1189336 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| |||||||||||||||| ||||| ||||| ||||| |||||||| | || Sbjct 1189335 TCACATCTTGGCCTTCTTCGCCGCATCTGATGGCATCGTCAACGAGAACCTCGTTGAAAG 1189276 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| ||||| ||| | |||||| ||||||||||||||||||||||| || Sbjct 1189275 ATTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 1189216 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||||||| ||| || ||| | |||| |||||| ||| ||| Sbjct 1189215 GGAGAACATCCACTCTGAGACCTACTCCCTACTCATTGACACTTACATCAAGGAGCCCTC 1189156 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGA-------TGCC-------------C 42635 |||| | | || ||||| ||||| ||||| | | || | Sbjct 1189155 TCAGCGCACCTACCTCTTCAACGCCATTGAGACCAGTATGTTTTCCCAGTCCCACAAAAC 1189096 Query 42636 TGCAT-----CAA----------------------------GAAGAAGGCGGACTGGGCG 42662 ||||| ||| |||||||| |||||||| Sbjct 1189095 TGCATGCACACAAACTAATCGACCATAGTTCCCTGCATCCGAAAGAAGGCTGACTGGGCC 1189036 Query 42663 CTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 || |||||| || ||| | | || | | || | ||||| |||||| | || Sbjct 1189035 ATCCGGTGGATCCAGGACAAGGACTCGTCCTTTGCCCAGCGCCTGGTTGCCTTTGCTGCT 1188976 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGT 42781 || ||||| ||||||||| || ||||| || |||||||||||||||||| || || Sbjct 1188975 GTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGC 1188916 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 || ||||| || || |||||||| ||||| || || | || ||||| || || | Sbjct 1188915 CTC-ATGCCTGGCCTGACCTTCTCCAACGAGCTGATTTCTCGTGATGAGGGCCTTCACAC 1188857 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCT-CAGGCACAAGCCCTCGAAGGAGCGGG 42900 ||||| |||||||| || ||| || || ||| | || | ||| || Sbjct 1188856 TGACTTCGCCTGCCTGCTCCACTC---TCATCTGAAGGGTCGTGCTAGC-AAGAAGATCA 1188801 Query 42901 TCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGC 42960 || | ||||||||| || ||||| |||||||||||||||||||| || | |||| Sbjct 1188800 TCGAAGACATCATCACTGATGCCGTCACCATCGAGAAGGAGTTCCTCACCGAGGCTCTGC 1188741 Query 42961 CCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCG 43020 || ||||| ||||||||||| ||||||||| ||||||| ||| ||| |||| Sbjct 1188740 CCTGCGCCCTGCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTTGCCG 1188681 Query 43021 ACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAACACGCCGTGCCCCT 43074 | | ||| || || | | |||| || || ||||||| || | ||||| Sbjct 1188680 ATCGTCTTCT-TG-----TCGCTCTCGGCAACGAGAAGGTCTACAAGTCGACCAACCCCT 1188627 Query 43075 TCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCG 43134 ||||||| |||||||||||||| | | |||||||||||||| ||||||||||| |||| Sbjct 1188626 TCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCG 1188567 Query 43135 CCGACTACCAG 43145 ||||||||| Sbjct 1188566 GTGACTACCAG 1188556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944300800807280