Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq17 104 2e-17 >seq17 Length=588636 Score = 104 bits (114), Expect = 2e-17 Identities = 128/174 (74%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 20476 GTACGACAAT-TGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCG 20534 || || |||| ||||| | ||||| || || ||||| | | | ||| || ||| | | Sbjct 452479 GTTCGGCAATCTGGTCGACACCCTGTCCAGTGTAGTCTGTCTTGGAGTCAACATACTCGG 452538 Query 20535 CCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCG 20594 | |||||||| | ||||||||||||||| ||||| || | || |||||| | ||| | Sbjct 452539 CGCCAAAGTGTCGCCACTGGAAACCGTAGACAGGACCAAGGTCACCCTCCTCACGGTGAG 452598 Query 20595 CCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648 ||||||| | | | |||||||| | |||||||||| ||||| ||||||| Sbjct 452599 TCAGGCCGAGGTTGTCGAGGAACTCGCGGGAGCCATTTCCATCCCAGATCTTGA 452652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441354852678520