Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq3070 109 4e-19
>seq3070
Length=537
Score = 109 bits (120), Expect = 4e-19
Identities = 159/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCG 33968
|| || ||||| ||||| || || |||||||||||||||||| || | || | || ||
Sbjct 242 AGACGGAGCACAAGATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTG-CG 184
Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028
|| || |||| |||||| || ||||| || ||||||||||||||| || | | ||
Sbjct 183 GTCATCCTCCAGTTGCTTTCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGAATTCCTTC 124
Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088
|||||| ||| || ||| | || | ||||| | || || ||||| ||
Sbjct 123 CTTGTCCTGAATCTTGGTCTTCACATTGCTGATGCTATCGGATGACTCTACTTCGAGAGT 64
Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130
|| || ||||||||||| ||||| || ||||| ||||| ||
Sbjct 63 GATAGTCTTTCCGGTTAGCGTTTTGACGAAGATCTGCATCTT 22
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397046658088906
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |