Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq3070 109 4e-19 >seq3070 Length=537 Score = 109 bits (120), Expect = 4e-19 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCG 33968 || || ||||| ||||| || || |||||||||||||||||| || | || | || || Sbjct 242 AGACGGAGCACAAGATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTG-CG 184 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 || || |||| |||||| || ||||| || ||||||||||||||| || | | || Sbjct 183 GTCATCCTCCAGTTGCTTTCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGAATTCCTTC 124 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088 |||||| ||| || ||| | || | ||||| | || || ||||| || Sbjct 123 CTTGTCCTGAATCTTGGTCTTCACATTGCTGATGCTATCGGATGACTCTACTTCGAGAGT 64 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130 || || ||||||||||| ||||| || ||||| ||||| || Sbjct 63 GATAGTCTTTCCGGTTAGCGTTTTGACGAAGATCTGCATCTT 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397046658088906