Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1388 152 1e-31 seq8 122 2e-22 seq6 116 9e-21 seq19 113 1e-19 seq3070 107 5e-18 seq15 84.2 5e-11 >seq1388 Length=1638 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| ||||| || | || |||||||||| || ||| |||||||| || ||||| | Sbjct 757 TCCGCCGCGAAGACGCAGCACGAGATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 816 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| ||||| || | ||| || || |||||||| |||||||| || || Sbjct 817 CAGGGTGCGACCGTCCTCAAGTTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 876 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| ||||| |||||||| || || | |||||||| || |||| ||| || || || Sbjct 877 GATGCCTTCCTTATCCTGAATCTTAGTCTTCACGTTCTCGATAGTGTCGGAGGACTCAAC 936 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || ||||| ||||| ||||| | ||||||||||| ||||||||| Sbjct 937 TTCAAGAGTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCATT 985 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | || || ||||||| || ||||| ||||| || || |||| Sbjct 301 TCCACCACGTAGACGGAGCACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGA 360 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| ||||| ||||| || | || || || |||||||| ||||| || || || Sbjct 361 GAGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGG 420 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| || ||||| ||||| | ||||| || || || | ||| ||||| || Sbjct 421 AATACCTTCCTTGTCCTGAATTTTAGTCTTCACATTCTCAATGGTATCCGAGGATTCCAC 480 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || ||||||||||| || |||||||| || |||||||| ||||| Sbjct 481 TTCAAGGGTGATCGTCTTACCAGTCAGAGTTTTCACGAATATTTGCAT 528 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | | |||||||||||| | ||| ||| || || || || ||||| | Sbjct 530 CCACCACGCAAGCGAAGTACGAGATGCAAAGTGGATTCCTTCTGAATGTTGTAGTCAGAA 589 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | ||| ||||| |||||||| ||||| || ||| ||| Sbjct 590 AGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCCGGGGGG 649 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || || || || | |||||||| || || | ||| ||||| ||| Sbjct 650 ATACCTTCCTTGTCTTGAATCTTAGTCTTCACGTTCTCGATGGTATCAGAGGATTCGACT 709 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || ||||| || || ||||||||||| || ||||||||| Sbjct 710 TCAAGAGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTGCATT 757 Score = 131 bits (144), Expect = 4e-25 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | || || || || | ||| || || |||||||| ||||||| Sbjct 1075 TCCACCGCGGAGACGGAGCACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCGGA 1134 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| |||||||| | || || || ||||| || || || || || || || Sbjct 1135 AAGAGTGCGACCGTCTTCGAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTG---GTCCGG 1191 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || ||||| || ||||| ||||| | || ||||| || |||| ||| || || Sbjct 1192 GGGAATACCTTCCTTGTCCTGAATTTTGGTCTTAACGTTCTCGATAGTGTCGGAGGACTC 1251 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || ||||| ||||| ||||| | ||||||||||| ||||||||| Sbjct 1252 AACTTCAAGAGTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTGCATT 1303 Score = 98.7 bits (108), Expect = 2e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | || || || || | ||| || || ||||| || ||||| | Sbjct 1303 TCCACCGCGGAGACGGAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 1362 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || |||||||| | || || || |||||||| ||||| || || || || Sbjct 1363 AAGAGTACGGCCGTCTTCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTG---GTCCGG 1419 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || ||||| || |||||||| || | || || || || || | ||| || || Sbjct 1420 GGGAATACCTTCCTTGTCCTGGATCTTGGTCTTGACATTCTCGATGGTGTCGGAAGACTC 1479 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || || ||||| || || | || || || || |||||||| Sbjct 1480 CACTTCGAGAGTAATAGTCTTGCCTGTTAAGGTTTTAACAAAGATCTGCAT 1530 >seq8 Length=1068389 Score = 122 bits (134), Expect = 2e-22 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || ||||| || ||||||| | Sbjct 631326 CCACCACGGAGGCGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 631267 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || ||||| ||||||||||||||||| || ||| Sbjct 631266 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 631207 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||||||||| |||| |||||||| || |||| ||| || || || Sbjct 631206 ATGCCCTCCTTATCCTGGATCTTCGACTTCACGTTGTCGATAGTATCCGAGGACTCGACC 631147 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCA 288451 || || ||||| ||||| || |||| Sbjct 631146 TCAAGGGTGATGGTCTTTCCCGTCA 631122 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || ||| || ||||| || || || | || || || || ||| Sbjct 632028 TCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAG 631969 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || || ||| || || || || ||||| || |||| ||||| Sbjct 631968 ATAAGTCGCTGCTGG---TCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACA 631912 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||||| || || || || || ||||||||||| |||||||| ||||| Sbjct 631911 TTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATCGTCTTTCCGGTCAGGGTCTTC 631852 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 631851 ACGAAGATCTGCAT 631838 Score = 96.9 bits (106), Expect = 8e-15 Identities = 154/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | || || || || || || ||||||| | Sbjct 631608 CCACCACGAAGGCGGAGGACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAG 631549 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||||| ||||| || || ||| Sbjct 631548 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGG---TCCGGG 631492 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||||||||| |||| || || || || |||| || || || Sbjct 631491 GGAATACCCTCCTTATCCTGGATCTTCGACTTGACATTGTCGATAGTGTCAGAAGACTCC 631432 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || ||||| ||||| ||||| ||||| || |||||||||| Sbjct 631431 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGA 631392 >seq6 Length=1299473 Score = 116 bits (128), Expect = 9e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 269098 GAAGCAGTTACAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGT 269157 || || || || | ||| || |||||| | || ||| | || || | || |||| Sbjct 1188783 GATGCCGTCACCATCGAGAAGGAGTTCCTCACCGAGGCTCTGCCCTGCGCCCTGCTCGGC 1188724 Query 269158 ATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTAT-CTTCACGGC 269216 ||||| | || |||||||| || || || || ||||| || |||||| | ||| || | Sbjct 1188723 ATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTTGCCGATCGTCTTCTTGTCG-C 1188665 Query 269217 ACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTC 269276 ||||| | ||||| || ||||| |||| || ||||||| ||| ||||| || || Sbjct 1188664 TCTCGGCAACGAGAAGGTCTACAAGTCGACCAACCCCTTCGACTTCATGGAGAACATCTC 1188605 Query 269277 GCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 |||| || ||||| ||||||||||| ||||||||| | ||||| || Sbjct 1188604 CCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 1188557 >seq19 Length=502728 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | || | ||||| || || ||||| || |||||| Sbjct 172574 CCACCACGGAGGCGGAGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 172633 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| || ||||| || ||| Sbjct 172634 AGAGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGG 172693 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| || || || Sbjct 172694 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 172753 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||||||||| || || ||||||||||| |||||||| Sbjct 172754 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 172800 >seq3070 Length=537 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||| | || || || || || || ||||||| Sbjct 251 CCACCACGAAGACGGAGCACAAGATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAC 192 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| | || || | ||| ||||| || ||||| || ||||| ||| || Sbjct 191 AGAGTGCGGTCATCCTCCAGTTGCTTTCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGA 132 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || ||||| || || | ||||| || || |||| || |||||| Sbjct 131 ATTCCTTCCTTGTCCTGAATCTTGGTCTTCACATTGCTGATGCTATCGGATGACTCTACT 72 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| || || |||||||| |||||||| Sbjct 71 TCGAGAGTGATAGTCTTTCCGGTTAGCGTTTTGACGAAGATCTGCAT 25 >seq15 Length=666898 Score = 84.2 bits (92), Expect = 5e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| ||||| || || || | || || || ||||||||| Sbjct 143564 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 143505 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || ||||| || ||||| || || || |||||||| || | || || || || Sbjct 143504 AGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 143445 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || || || || || ||||| ||||| || || || ||||| ||||| Sbjct 143444 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 143386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179605233110534