Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq5 199 5e-46
>seq5
Length=1316942
Score = 199 bits (220), Expect = 5e-46
Identities = 1105/1752 (63%), Gaps = 57/1752 (3%)
Strand=Plus/Minus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|| ||||||||||| || |||||||| || |||||||| || | ||||| ||
Sbjct 715444 CGTAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATGCTGGTA 715385
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716
| ||| | || || | |||| || ||| | ||||| ||||| ||||||
Sbjct 715384 ATCTTACCCATGGTAGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAG 715325
Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG----ATTTCCCACACAGT 113772
|| || || || | ||| | || || || | || || |||||||||||
Sbjct 715324 GCACCTCGGTCGGCAGACATCTGGATGAC----TTGACGCTGGGAAATCTCCCACACAGT 715269
Query 113773 TCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGC 113832
|||| || ||| |||||| | || || | ||| | |||||||| |||||| |
Sbjct 715268 CTTGTACAGAGACTTGATATCAGCGGGAATGTTGGGGATGTCCTGGATGGAACCACCCTC 715209
Query 113833 CTTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTC 113889
| | |||| | | |||||| | | ||||| | || || | || ||||
Sbjct 715208 ---GGCAATGATTCGGTTCTTCATGGCATCAGACCACAAGCCCATATCGACTAGGTCCTT 715152
Query 113890 CACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATT 113949
| ||| |||||||| |||||||| || ||| || | | | || || ||
Sbjct 715151 GAGGAGCCAGGGGTTGACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAAATGTT 715092
Query 113950 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGG 114009
| || || ||||||||||| || ||||| || | ||| || | || ||| || ||
Sbjct 715091 TGAGGTATAGGGCTCAAAGCATTCGTTGTTGCCTAGGATCTGCGAAGTACTGGCCGTAGG 715032
Query 114010 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGC 114069
|||||| || | ||| | |||||| || || || | ||| | | | || ||| |
Sbjct 715031 CATGGGGGCGAGGAGCAAGCTGTTGCGAAGGCCATGCTCCTTGACCTGCTCACGGAGAGT 714972
Query 114070 GTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCT 114127
|||||||| | | | || | || | | | |||||| |||||||| ||||| ||
Sbjct 714971 CTCCCAGTCCCAAAGGTCAGAG--GGCTTCACGTTCCACATGTCAAACTGAAGGATGCCC 714914
Query 114128 TGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT---CG 114184
| || || || || |||| ||| || ||| ||||||| ||| || | | ||
Sbjct 714913 TCAGAAGCGGGAGAGCCCTTAAAGGTGGAGTAGGGGCCCTGCTCCTTGGCGAGCTGCACG 714854
Query 114185 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTG 114244
||| | | ||||| ||||| || || |||||||| || | |||| |
Sbjct 714853 GAGGCAGTC---AGGGCAGCGTGGTAGATGGTCTCAAATATCTGCTTGTTCAGCTCACGA 714797
Query 114245 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 114304
||||| ||| || || | | || | || |||| || ||||| ||||||
Sbjct 714796 GCCTCAGGGGACTCGAAGGGCATGCGAAGAGCGAGGAAGGCATCGGCAAGACCCTGGACA 714737
Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA---CGGGATAA 114361
|| | |||||| || | || | ||| || || ||||| ||| | |||| ||
Sbjct 714736 CCAACGCCAATGGGTCTGTGGCGCATGTTGCTGTTGCGAGC---CTCAATGACGGGGTAG 714680
Query 114362 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 114421
|| ||||| | | | || | || | || |||| |||| ||| || |||
Sbjct 714679 TGGTTGACGTCGATGATCTTGTTCAAGTTGCGGACAACGACCTGGGTGACTTCGTGCAGC 714620
Query 114422 TTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 114481
|| | | | || | | || | | | |||| || ||| || || | || ||
Sbjct 714619 TTCTTGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAACGAAGGCAGAGCCAGGGAGGCA 714560
Query 114482 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 114541
|| ||||| |||| | |||||| || |||||| || || || || || | ||
Sbjct 714559 AGGTTACAGACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCAGAGGTTG 714500
Query 114542 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 114601
|| || |||||||||| |||||| || || ||| ||| || || ||||||||
Sbjct 714499 GAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCATGCGTCCTTGTAC 714440
Query 114602 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGC 114660
|||||| | || | || ||||| ||||| | || ||| || || | ||| | | || |
Sbjct 714439 AGCATGAAGGGGTTGCCGGTCTCAGTTTGAGCCTCGAGGATGGCGTACCACAACTTCTGA 714380
Query 114661 GGCTGGCACAGTGGCGTTGGCTCGCCCCTC------CTCCTCGTACTTTGTGTAGAGGGC 114714
| || || ||| ||| || |||| || ||||||||| ||| | |||
Sbjct 714379 GCCTT---CA-TGGTCTTG---CGACCCTTGCCAAGCTTCTCGTACTTCTCGTATAAGGC 714327
Query 114715 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 114774
|| ||||| || || | || | || || || || | ||||| | ||||
Sbjct 714326 CTCGAACTCCTCGCCGTAGCAGTCGGCAAGGCCAGGGCACTCGTTGGGGCACATCAGAGT 714267
Query 114775 CCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAA 114834
||| | || || |||||| |||||||||||||| || |||||||| || ||| |||
Sbjct 714266 CCAATCGCCGTTCTTCTCAACCCGCTTCATGAAGAGATCAGGGATCCAAAGGGCTAGGAA 714207
Query 114835 GAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCAT 114894
||||| || ||| | ||||| | || || || |||| |||| || || |
Sbjct 714206 AAGATCGCGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAA 714147
Query 114895 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCC-----CTTACGACGACC 114948
|| |||||||||||| || || ||||| | |||| | |||| ||| | | ||
Sbjct 714146 GACATCCGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCGGTCGCTT--GTTG-CC 714090
Query 114949 AGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATC 115008
| |||||| || || | || ||| || || || || ||||| ||||||| ||| |
Sbjct 714089 ACCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGACACCGTT 714030
Query 115009 AGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCAT 115068
|| || || || || ||| ||| | |||| | || | || || |
Sbjct 714029 GGAGGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATACGGTGAGCGTTGAG 713970
Query 115069 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 115128
||| ||||| || ||| ||| ||||| || ||| | ||||| || | ||||| ||
Sbjct 713969 ACCGATACCGCCAGCCATCTTGGAGATCATGGCACACGTCTTGAGAGTGTCATAGATACC 713910
Query 115129 GTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGT 115188
||||| || |||| | | | ||||||||| |||| || ||| || ||
Sbjct 713909 CTCGATGCTATCCTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGGGGCTGAGGGGT 713850
Query 115189 ACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCG 115246
|||||||||||| ||||| || | || ||| | ||| | |||| |||||| | |
Sbjct 713849 ACCAGCGTTGAAAAGGGTGGGCGAAGCATGGGTAAAC--AGCTTGCTGGACATGAGGTTG 713792
Query 115247 TAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAAC 115306
|||||||||| ||| |||||| || || || || | || || ||||| | |
Sbjct 713791 TAGGTCTCCAGGACACGCTCAATGTCATCGCCCCAGATGCCAACAGACACACGCATGATC 713732
Query 115307 ATGTATTGGGGT 115318
|||| || |||
Sbjct 713731 ATGTGCTGCGGT 713720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597329310109240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |