Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq5 307 1e-78
>seq5
Length=1316942
Score = 307 bits (340), Expect = 1e-78
Identities = 1078/1665 (65%), Gaps = 26/1665 (2%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | ||||| ||||||||| || || ||||||||||| || |||
Sbjct 713646 AACTACCAATACTTCGGTTTCAAGACTCTGGAGCGATCTTATCTCCTCAAGATTGACGGC 713705
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||||||||| || || | ||||| || | | || || ||| |
Sbjct 713706 AAGATTGTTGAGCGACCGCAGCACATGATCATGCGTGTGTCTGTTGGCATCTGGGGCGAT 713765
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| | ||| || | | | || |||| |||| || |||| ||
Sbjct 713766 GACATTGAGCGTGTCCTGGAGACCTACAACCTCATGTCCAGCAAGCTGTTTACCCATGCT 713825
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| || ||||| |||||||| || ||||| ||| ||| ||||||| || |||||| |
Sbjct 713826 TCGCCCACCCTTTTCAACGCTGGTACCCCTCAGCCCCAGCTGTCTTCCTGCTTCCTGGTT 713885
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| || |||| || || | |||| |||||| ||||| | ||
Sbjct 713886 GAC-ATGAAGGAGGATAGCATCGAGGGTATCTATGACACTCTCAAGACGTGTGCCATGAT 713944
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071
||| || || || || ||||| ||| | ||| |||| ||||||| || ||
Sbjct 713945 CTCCAAGATGGCTGGCGGTATCGGTCTCAACGCTCAC--CGTATCCGTGCCACTGGCTCT 714002
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| ||||||||| || ||||||||||| || | || |||||||| |||||||||
Sbjct 714003 TACATTGCCGGTACCAACGGTACCTCCAACGGTGTCATTCCCATGCTCCGTGTCTTCAAC 714062
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || || ||||| ||||||||||| | | | |||| ||||||| ||||
Sbjct 714063 AACACTGCTCGATACGTCGACCAGGGTGGCAACAAGCGACCGGGTGCTTTCGCCATCTAC 714122
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|||||||||||||||||||| || | ||| | |||||||| ||||||||||||||
Sbjct 714123 CTCGAGCCCTGGCACGCGGATGTCTTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAG 714182
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| || | ||| | || || ||| || || ||| | || || || || |||||
Sbjct 714183 GAAGAGGTCCGCGCCCGCGATCTTTTCCTAGCCCTTTGGATCCCTGATCTCTTCATGAAG 714242
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| || ||||| ||| || |||| ||| | || ||||| || || || || || ||
Sbjct 714243 CGGGTTGAGAAGAACGGCGATTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTTGCC 714302
Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431
||| | || | || || | ||| || | ||||| || |||||||
Sbjct 714303 GACTGCTACGGCGAGGAGTTCGAGGCCTTATACGAGAAGTACGAGAAGCTTGGCAAGGGT 714362
Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491
| ||| ||| | ||| |||| ||||| | ||| | || | || |||||
Sbjct 714363 CGCAAGACCATGAAGGCTCAGAAGTTGTGGTACGCCATCCTCGAGGCTCAAACTGAGACC 714422
Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551
|| | |||| ||| ||| ||||||| | |||| |||| ||||||| || ||||
Sbjct 714423 GGCAACCCCTTCATGCTGTACAAGGACGCATGCAACCGCAAGAGCAACCAGAAGAACCTG 714482
Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611
|| ||| ||||| || || ||||| ||||| | ||||| | | || || |||
Sbjct 714483 GGCACCATCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTGTGCCCCTGATGAG 714542
Query 94612 ATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACG 94671
| ||||| |||||||| | |||| | ||| | | || || ||| |||||
Sbjct 714543 GTCGCTGTCTGTAACCTTGCCTCCCTGGCTCTGCCTTCGTTTGT-CGA-----CTACA-- 714594
Query 94672 TCTACTGCTTCGTTCGATCTGGAGGAGCT-TGTGAACT-TCGCGGGAAGGATGGTCTTGA 94729
| | ||| | | ||| | || |||| ||| | | | || | | ||| |
Sbjct 714595 ACGAGGGCTGC-TACGACTTCAAGAAGCTGCACGAAGTCACCCAGGTCG--TTGTCCGCA 714651
Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789
|| |||||| | | |||||| ||| |||||||||| ||||| ||| |||
Sbjct 714652 ACTTGAACAAGATCATCGACGTCAACCACTACCCCGTCATTGAGGCTCGCAACAGCAACA 714711
Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849
|| || | ||||| ||| | || ||||||||| | || || || | | | |
Sbjct 714712 TGCGCCACAGACCCATTGGCGTTGGTGTCCAGGGTCTTGCCGATGCCTTCCTCGCTCTTC 714771
Query 94850 GTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTT 94909
| |||||| ||| || || || | |||| | | ||||| || | ||| |
Sbjct 714772 GCATGCCCTTCGAGTCCCCTGAGGCTCGTGAGCTGAACAAGCAGATATTTGAGACCATCT 714831
Query 94910 ATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC-ACGAA 94968
| ||| ||| ||| ||||| || | |||| ||| | ||||| | ||
Sbjct 714832 ACCACGCTGCCCTGACTGCCTCCGTGCAGCTCGCCA---AGGA-GCAGGGCCCCTACTCC 714887
Query 94969 TCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAG 95028
| || || || ||| ||||||| ||||||| ||| | ||| ||||||
Sbjct 714888 ACCTTTAAGGGCTCTCCCGCTTCTGAGGGCATCCTTCAGTTTGACATGTGGAACGTGAAG 714947
Query 95029 CCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAA 95088
||||| | || | |||||||| |||| || | | || | | || || |
Sbjct 714948 CCCTCTGACCTTTGGGACTGGGAGACTCTCCGTGAGCAGGTCAAGGAGCATGGCCTTCGC 715007
Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148
||| |||| | ||||||||||| |||||| || |||||||||| |||||||||
Sbjct 715008 AACAGCTTGCTCCTCGCCCCCATGCCTACGGCCAGTACTTCGCAGATCCTAGGCAACAAC 715067
Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208
|| | || || |||| ||||| ||| | ||| | | || || || || || || |||
Sbjct 715068 GAATGCTTTGAGCCCTATACCTCAAACATTTACCAGCGCCGTGTCCTGGCTGGTGAGTTC 715127
Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAA 95267
| || ||||| ||||| |||||| | || | |||| ||||| |||
Sbjct 715128 CAGGTTGTCAACCCCTGGCTCCTCAAGGACCTAGTCG-ATATGGGCTTGTGGTCTGATGC 715186
Query 95268 GGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGA 95327
| ||||||| | | | || || ||| ||||| ||||||| | || || |
Sbjct 715187 CATGAAGAACCGAATCATTGCCGAGGGTGGTTCCATCCAGGACATCCCCAACATTCCCGC 715246
Query 95328 GGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|| |||||| | || |||||||| ||||||||||| | |||||
Sbjct 715247 TGATATCAAGTCTCTGTACAAGACTGTGTGGGAGATTTCCCAGCG 715291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494703083317880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |