Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5 307 1e-78 >seq5 Length=1316942 Score = 307 bits (340), Expect = 1e-78 Identities = 1078/1665 (65%), Gaps = 26/1665 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | ||||| ||||||||| || || ||||||||||| || ||| Sbjct 713646 AACTACCAATACTTCGGTTTCAAGACTCTGGAGCGATCTTATCTCCTCAAGATTGACGGC 713705 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||||||||||| || || | ||||| || | | || || ||| | Sbjct 713706 AAGATTGTTGAGCGACCGCAGCACATGATCATGCGTGTGTCTGTTGGCATCTGGGGCGAT 713765 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| | ||| || | | | || |||| |||| || |||| || Sbjct 713766 GACATTGAGCGTGTCCTGGAGACCTACAACCTCATGTCCAGCAAGCTGTTTACCCATGCT 713825 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 | || ||||| |||||||| || ||||| ||| ||| ||||||| || |||||| | Sbjct 713826 TCGCCCACCCTTTTCAACGCTGGTACCCCTCAGCCCCAGCTGTCTTCCTGCTTCCTGGTT 713885 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| || |||| || || | |||| |||||| ||||| | || Sbjct 713886 GAC-ATGAAGGAGGATAGCATCGAGGGTATCTATGACACTCTCAAGACGTGTGCCATGAT 713944 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071 ||| || || || || ||||| ||| | ||| |||| ||||||| || || Sbjct 713945 CTCCAAGATGGCTGGCGGTATCGGTCTCAACGCTCAC--CGTATCCGTGCCACTGGCTCT 714002 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||||||||| || ||||||||||| || | || |||||||| ||||||||| Sbjct 714003 TACATTGCCGGTACCAACGGTACCTCCAACGGTGTCATTCCCATGCTCCGTGTCTTCAAC 714062 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || || ||||| ||||||||||| | | | |||| ||||||| |||| Sbjct 714063 AACACTGCTCGATACGTCGACCAGGGTGGCAACAAGCGACCGGGTGCTTTCGCCATCTAC 714122 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 |||||||||||||||||||| || | ||| | |||||||| |||||||||||||| Sbjct 714123 CTCGAGCCCTGGCACGCGGATGTCTTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAG 714182 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || || | ||| | || || ||| || || ||| | || || || || ||||| Sbjct 714183 GAAGAGGTCCGCGCCCGCGATCTTTTCCTAGCCCTTTGGATCCCTGATCTCTTCATGAAG 714242 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || || ||||| ||| || |||| ||| | || ||||| || || || || || || Sbjct 714243 CGGGTTGAGAAGAACGGCGATTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTTGCC 714302 Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 ||| | || | || || | ||| || | ||||| || ||||||| Sbjct 714303 GACTGCTACGGCGAGGAGTTCGAGGCCTTATACGAGAAGTACGAGAAGCTTGGCAAGGGT 714362 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | ||| ||| | ||| |||| ||||| | ||| | || | || ||||| Sbjct 714363 CGCAAGACCATGAAGGCTCAGAAGTTGTGGTACGCCATCCTCGAGGCTCAAACTGAGACC 714422 Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551 || | |||| ||| ||| ||||||| | |||| |||| ||||||| || |||| Sbjct 714423 GGCAACCCCTTCATGCTGTACAAGGACGCATGCAACCGCAAGAGCAACCAGAAGAACCTG 714482 Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 || ||| ||||| || || ||||| ||||| | ||||| | | || || ||| Sbjct 714483 GGCACCATCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTGTGCCCCTGATGAG 714542 Query 94612 ATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACG 94671 | ||||| |||||||| | |||| | ||| | | || || ||| ||||| Sbjct 714543 GTCGCTGTCTGTAACCTTGCCTCCCTGGCTCTGCCTTCGTTTGT-CGA-----CTACA-- 714594 Query 94672 TCTACTGCTTCGTTCGATCTGGAGGAGCT-TGTGAACT-TCGCGGGAAGGATGGTCTTGA 94729 | | ||| | | ||| | || |||| ||| | | | || | | ||| | Sbjct 714595 ACGAGGGCTGC-TACGACTTCAAGAAGCTGCACGAAGTCACCCAGGTCG--TTGTCCGCA 714651 Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789 || |||||| | | |||||| ||| |||||||||| ||||| ||| ||| Sbjct 714652 ACTTGAACAAGATCATCGACGTCAACCACTACCCCGTCATTGAGGCTCGCAACAGCAACA 714711 Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849 || || | ||||| ||| | || ||||||||| | || || || | | | | Sbjct 714712 TGCGCCACAGACCCATTGGCGTTGGTGTCCAGGGTCTTGCCGATGCCTTCCTCGCTCTTC 714771 Query 94850 GTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTT 94909 | |||||| ||| || || || | |||| | | ||||| || | ||| | Sbjct 714772 GCATGCCCTTCGAGTCCCCTGAGGCTCGTGAGCTGAACAAGCAGATATTTGAGACCATCT 714831 Query 94910 ATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC-ACGAA 94968 | ||| ||| ||| ||||| || | |||| ||| | ||||| | || Sbjct 714832 ACCACGCTGCCCTGACTGCCTCCGTGCAGCTCGCCA---AGGA-GCAGGGCCCCTACTCC 714887 Query 94969 TCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAG 95028 | || || || ||| ||||||| ||||||| ||| | ||| |||||| Sbjct 714888 ACCTTTAAGGGCTCTCCCGCTTCTGAGGGCATCCTTCAGTTTGACATGTGGAACGTGAAG 714947 Query 95029 CCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAA 95088 ||||| | || | |||||||| |||| || | | || | | || || | Sbjct 714948 CCCTCTGACCTTTGGGACTGGGAGACTCTCCGTGAGCAGGTCAAGGAGCATGGCCTTCGC 715007 Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| |||| | ||||||||||| |||||| || |||||||||| ||||||||| Sbjct 715008 AACAGCTTGCTCCTCGCCCCCATGCCTACGGCCAGTACTTCGCAGATCCTAGGCAACAAC 715067 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 || | || || |||| ||||| ||| | ||| | | || || || || || || ||| Sbjct 715068 GAATGCTTTGAGCCCTATACCTCAAACATTTACCAGCGCCGTGTCCTGGCTGGTGAGTTC 715127 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAA 95267 | || ||||| ||||| |||||| | || | |||| ||||| ||| Sbjct 715128 CAGGTTGTCAACCCCTGGCTCCTCAAGGACCTAGTCG-ATATGGGCTTGTGGTCTGATGC 715186 Query 95268 GGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGA 95327 | ||||||| | | | || || ||| ||||| ||||||| | || || | Sbjct 715187 CATGAAGAACCGAATCATTGCCGAGGGTGGTTCCATCCAGGACATCCCCAACATTCCCGC 715246 Query 95328 GGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || |||||| | || |||||||| ||||||||||| | ||||| Sbjct 715247 TGATATCAAGTCTCTGTACAAGACTGTGTGGGAGATTTCCCAGCG 715291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494703083317880