Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1388 113 3e-20 seq8 84.2 2e-11 >seq1388 Length=1638 Score = 113 bits (124), Expect = 3e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| ||||| ||||| || |||||||||||| ||| | | |||| || | || Sbjct 325 ATGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGACCGTCCTCAAGCTG 384 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || |||||| | || | ||| || ||||| ||||| ||||||||||| |||||| Sbjct 385 CTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGAATTTT 444 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | || || ||||| ||| || || | ||| || || ||||| || Sbjct 445 AGTCTTCACATTCTCAATGGTATCCGAGGATTCCACTTCAAGGGTGATCGTCTTACCAGT 504 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 ||||||||| || || ||||||||| Sbjct 505 CAGAGTTTTCACGAATATTTGCATA 529 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || |||||||| || ||| | | ||||||| | || Sbjct 1328 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCTTCGAGCTGC 1387 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||||||| | || | ||| || ||||| ||||| ||||||||||| || ||| Sbjct 1388 TTGCCAGCGAAGATAAGACGTTGCTGGTCCGGGGGAATACCTTCCTTGTCCTGGATCTTG 1447 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 | || ||| | || || || ||| | || || || | ||||| || || ||||| Sbjct 1448 GTCTTGACATTCTCGATGGTGTCGGAAGACTCCACTTCGAGAGTAATAGTCTTGCCTGTT 1507 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 | ||||| ||||| || |||||| Sbjct 1508 AAGGTTTTAACAAAGATCTGCATA 1531 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| ||||| ||||| || |||||||||||| ||| | | |||| || | || Sbjct 98 TGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCCTCGAGCTGC 157 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | || | |||||| ||||| || || |||||||| || ||| || Sbjct 158 TTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGAATCTTA 217 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 | || || | || ||||| ||| ||| || || | |||||||| || || || Sbjct 218 GTCTTGACGTTCTCAATAGTGTCGGAGGATTCCACCTCAAGAGTAATGGTCTTTCCAGTA 277 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || || ||||| ||||| Sbjct 278 AGGGTCTTCACGAAAATCTGCAT 300 >seq8 Length=1068389 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||||||||| || || || |||||||||||||| || | | | || || | || Sbjct 632040 TGAAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCATCCTCCAGCTGC 631981 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | || | ||||| |||||| ||||| || |||||||| ||| || Sbjct 631980 TTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTC 631921 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || |||||||| || || || | || || || || || ||| Sbjct 631920 GACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATCGTCTTTCCGGTC 631861 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 || || || || || || |||||| Sbjct 631860 AGGGTCTTCACGAAGATCTGCATA 631837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357377830859105