Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq5 199 5e-46
seq6 122 1e-22
>seq5
Length=1316942
Score = 199 bits (220), Expect = 5e-46
Identities = 1110/1753 (63%), Gaps = 59/1753 (3%)
Strand=Plus/Minus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|| ||||||||||| || |||||||| || |||||||| || | ||||| ||
Sbjct 715444 CGTAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATGCTGGTA 715385
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677
| ||| | || || | |||| || ||| | ||||| ||||| ||||||
Sbjct 715384 ATCTTACCCATGGTAGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAG 715325
Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG----ATTTCCCACACAGT 115733
|| || || || | ||| | || || || | || || |||||||||||
Sbjct 715324 GCACCTCGGTCGGCAGACATCTGGATGAC----TTGACGCTGGGAAATCTCCCACACAGT 715269
Query 115734 TCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGC 115793
|||| || ||| |||||| | || || | ||| | ||||| || |||||
Sbjct 715268 CTTGTACAGAGACTTGATATCAGCGGGAATGTTGGGGATGTCCTGGATGGAACCACC--- 715212
Query 115794 CTTGACCATGA---GATCCTTCATATCCTTTGACCAGA-GACCA-ATCTTCTTGAGATCC 115848
|| | | |||| | | |||||| | | ||||| | | ||| ||| || || |||
Sbjct 715211 CTCGGCAATGATTCGGTTCTTCATGGCATCAGACCACAAGCCCATATCGACT--AGGTCC 715154
Query 115849 TCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATG 115908
| | ||| |||||||| |||||||| || ||| || | | | || |||
Sbjct 715153 TTGAGGAGCCAGGGGTTGACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAAATG 715094
Query 115909 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 115968
|| | || || ||||||||||| || ||||| || | ||| || | || ||| ||
Sbjct 715093 TTTGAGGTATAGGGCTCAAAGCATTCGTTGTTGCCTAGGATCTGCGAAGTACTGGCCGTA 715034
Query 115969 GGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGG 116028
|||||||| || | ||| | ||||||||| || || | || | | | || |||
Sbjct 715033 GGCATGGGGGCGAGGAGCAAGCTGTTGCGAAGGCCATGCTCCTTGACCTGCTCACGGAGA 714974
Query 116029 GCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATAC 116086
| |||||||| | | | || | || | | | |||||| |||||||| ||||| |
Sbjct 714973 GTCTCCCAGTCCCAAAGGTCAGAG--GGCTTCACGTTCCACATGTCAAACTGAAGGATGC 714916
Query 116087 CTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT--- 116143
| | || || || || |||| ||| || || ||||||| ||| || | |
Sbjct 714915 CCTCAGAAGCGGGAGAGCCCTTAAAGGTGGAGTAGGGGCCCTGCTCCTTGGCGAGCTGCA 714856
Query 116144 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 116203
||||| | | ||||| ||||| || || |||||||| || | |||| |
Sbjct 714855 CGGAGGCAGTC---AGGGCAGCGTGGTAGATGGTCTCAAATATCTGCTTGTTCAGCTCAC 714799
Query 116204 TGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGA 116263
||||| ||| || || | | || | || |||| || ||||| ||||
Sbjct 714798 GAGCCTCAGGGGACTCGAAGGGCATGCGAAGAGCGAGGAAGGCATCGGCAAGACCCTGGA 714739
Query 116264 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA---CGGGAT 116320
|||| | |||||| || | || | ||| || || ||||| ||| | |||| |
Sbjct 714738 CACCAACGCCAATGGGTCTGTGGCGCATGTTGCTGTTGCGAGC---CTCAATGACGGGGT 714682
Query 116321 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 116380
| || ||||| | | | || | || | || |||| |||| ||| || |
Sbjct 714681 AGTGGTTGACGTCGATGATCTTGTTCAAGTTGCGGACAACGACCTGGGTGACTTCGTGCA 714622
Query 116381 GCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACG 116440
|||| | | | || | | || | | | |||| || ||| || || | || |
Sbjct 714621 GCTTCTTGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAACGAAGGCAGAGCCAGGGAGG 714562
Query 116441 CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAAT 116500
| || ||||| |||| | |||||| || |||||| || || || || || | |
Sbjct 714561 CAAGGTTACAGACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCAGAGGT 714502
Query 116501 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 116560
| || || |||||||||| |||||| || || ||| ||| || || |||||||
Sbjct 714501 TGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCATGCGTCCTTGT 714442
Query 116561 AGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCG 116619
| ||||| | || | || ||||| ||||| | || ||| || || | ||| | | ||
Sbjct 714441 ACAGCATGAAGGGGTTGCCGGTCTCAGTTTGAGCCTCGAGGATGGCGTACCACAACTTCT 714382
Query 116620 GCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC------CTCCTCGTACTTTGTGTAGAGG 116673
| | || || ||| ||| || |||| || ||||||||| ||| | |
Sbjct 714381 GAGCCTT---CA-TGGTCTTG---CGACCCTTGCCAAGCTTCTCGTACTTCTCGTATAAG 714329
Query 116674 GCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAG 116732
||||| ||||| || || ||| || | || || || || | || || | ||
Sbjct 714328 GCCTCGAACTCCTCGCCGT-AGCAGTCGGCAAGGCCAGGGCACTCGTTGGGGCACATCAG 714270
Query 116733 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792
|| ||| | || || ||||||||||||||||||||| || |||||||| || ||
Sbjct 714269 AGTCCAATCGCCGTTCTTCTCAACCCGCTTCATGAAGAGATCAGGGATCCAAAGGGCTAG 714210
Query 116793 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 116852
||| ||||| || ||| | ||||| | || || || |||| |||| || ||
Sbjct 714209 GAAAAGATCGCGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTC 714150
Query 116853 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCC-CTTGC--GACGAC 116908
| || |||||||||||| || || ||||| | |||| | |||| | || | | |
Sbjct 714149 GAAGACATCCGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCGGTCGCTTGTTG-C 714091
Query 116909 CAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCAT 116968
|| |||||| || || | || || ||| || || || ||||| ||||||| ||| |
Sbjct 714090 CACCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGACACCGT 714031
Query 116969 CAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCA 117028
|| || || || || ||| ||| |||| | || | ||| || |
Sbjct 714030 TGGAGGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATACGGTGAGCGTTGA 713971
Query 117029 TACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCC 117088
||| ||||| || ||| ||| ||||| || ||| | ||||| || | ||||| |
Sbjct 713970 GACCGATACCGCCAGCCATCTTGGAGATCATGGCACACGTCTTGAGAGTGTCATAGATAC 713911
Query 117089 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTG 117148
| ||||| || |||| | | | ||||||||| |||| || ||| || |
Sbjct 713910 CCTCGATGCTATCCTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGGGGCTGAGGGG 713851
Query 117149 TACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATC 117206
||||||||||||| ||||| || | || ||| | ||| | |||| |||||| |
Sbjct 713850 TACCAGCGTTGAAAAGGGTGGGCGAAGCATGGGTAAAC--AGCTTGCTGGACATGAGGTT 713793
Query 117207 GTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAA 117266
||||||||||| |||| |||||| || || || || | || || ||||| |
Sbjct 713792 GTAGGTCTCCAGGACACGCTCAATGTCATCGCCCCAGATGCCAACAGACACACGCATGAT 713733
Query 117267 CATGTATTGGGGT 117279
||||| || |||
Sbjct 713732 CATGTGCTGCGGT 713720
>seq6
Length=1299473
Score = 122 bits (134), Expect = 1e-22
Identities = 303/455 (67%), Gaps = 10/455 (2%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||||| ||||||||||||||||| ||||| ||| ||||| ||| ||||||||
Sbjct 1188559 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCAT 1188618
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348
|| || || ||||| | || || | | || | | || | | || |||
Sbjct 1188619 GAAGTCGAAGGGGTTGGTCGACTTGTAGACCTTCTCGTTGCCGAGAGC--GACAAGAAGA 1188676
Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408
||||| | ||| |||||||||||| ||| ||||||||||| |||| |||
Sbjct 1188677 CGATCGGCAACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGCAGGGCG 1188736
Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468
|| || || || || || |||| ||||||| ||| || || || | |||| |
Sbjct 1188737 CAGGGCAGAGCCTCGGTGAGGAACTCCTTCTCGATGGTGACGGCATCAGTGATGATGTCT 1188796
Query 127469 TGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAAC 127525
| || | | | | || | | || | || | || || || || ||
Sbjct 1188797 TCGATGATCTTCTTGCTAGCACGACCCTTCAGATGAGAGTGGAGCAG--GCA-GGCGAAG 1188853
Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585
|| ||| || ||||| ||||| || || || || || |||||| ||| || ||||||
Sbjct 1188854 TCAGTGTGAAGGCCCTCATCACGAGAAATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATG 1188913
Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645
|| || |||||||| | |||||| || | | ||| | || ||||||||| |||||
Sbjct 1188914 AGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTCA 1188973
Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAAGGA 127680
||| || || |||| || |||| |||||||||
Sbjct 1188974 ACAGCAGCAAAGGCAACCAGGCGCTGGGCAAAGGA 1189008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613482253263480
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