Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5 199 5e-46 seq6 122 1e-22 >seq5 Length=1316942 Score = 199 bits (220), Expect = 5e-46 Identities = 1110/1753 (63%), Gaps = 59/1753 (3%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || |||||||| || |||||||| || | ||||| || Sbjct 715444 CGTAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATGCTGGTA 715385 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||| | || || | |||| || ||| | ||||| ||||| |||||| Sbjct 715384 ATCTTACCCATGGTAGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAG 715325 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG----ATTTCCCACACAGT 115733 || || || || | ||| | || || || | || || ||||||||||| Sbjct 715324 GCACCTCGGTCGGCAGACATCTGGATGAC----TTGACGCTGGGAAATCTCCCACACAGT 715269 Query 115734 TCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGC 115793 |||| || ||| |||||| | || || | ||| | ||||| || ||||| Sbjct 715268 CTTGTACAGAGACTTGATATCAGCGGGAATGTTGGGGATGTCCTGGATGGAACCACC--- 715212 Query 115794 CTTGACCATGA---GATCCTTCATATCCTTTGACCAGA-GACCA-ATCTTCTTGAGATCC 115848 || | | |||| | | |||||| | | ||||| | | ||| ||| || || ||| Sbjct 715211 CTCGGCAATGATTCGGTTCTTCATGGCATCAGACCACAAGCCCATATCGACT--AGGTCC 715154 Query 115849 TCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATG 115908 | | ||| |||||||| |||||||| || ||| || | | | || ||| Sbjct 715153 TTGAGGAGCCAGGGGTTGACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAAATG 715094 Query 115909 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 115968 || | || || ||||||||||| || ||||| || | ||| || | || ||| || Sbjct 715093 TTTGAGGTATAGGGCTCAAAGCATTCGTTGTTGCCTAGGATCTGCGAAGTACTGGCCGTA 715034 Query 115969 GGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGG 116028 |||||||| || | ||| | ||||||||| || || | || | | | || ||| Sbjct 715033 GGCATGGGGGCGAGGAGCAAGCTGTTGCGAAGGCCATGCTCCTTGACCTGCTCACGGAGA 714974 Query 116029 GCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATAC 116086 | |||||||| | | | || | || | | | |||||| |||||||| ||||| | Sbjct 714973 GTCTCCCAGTCCCAAAGGTCAGAG--GGCTTCACGTTCCACATGTCAAACTGAAGGATGC 714916 Query 116087 CTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT--- 116143 | | || || || || |||| ||| || || ||||||| ||| || | | Sbjct 714915 CCTCAGAAGCGGGAGAGCCCTTAAAGGTGGAGTAGGGGCCCTGCTCCTTGGCGAGCTGCA 714856 Query 116144 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 116203 ||||| | | ||||| ||||| || || |||||||| || | |||| | Sbjct 714855 CGGAGGCAGTC---AGGGCAGCGTGGTAGATGGTCTCAAATATCTGCTTGTTCAGCTCAC 714799 Query 116204 TGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGA 116263 ||||| ||| || || | | || | || |||| || ||||| |||| Sbjct 714798 GAGCCTCAGGGGACTCGAAGGGCATGCGAAGAGCGAGGAAGGCATCGGCAAGACCCTGGA 714739 Query 116264 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA---CGGGAT 116320 |||| | |||||| || | || | ||| || || ||||| ||| | |||| | Sbjct 714738 CACCAACGCCAATGGGTCTGTGGCGCATGTTGCTGTTGCGAGC---CTCAATGACGGGGT 714682 Query 116321 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 116380 | || ||||| | | | || | || | || |||| |||| ||| || | Sbjct 714681 AGTGGTTGACGTCGATGATCTTGTTCAAGTTGCGGACAACGACCTGGGTGACTTCGTGCA 714622 Query 116381 GCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACG 116440 |||| | | | || | | || | | | |||| || ||| || || | || | Sbjct 714621 GCTTCTTGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAACGAAGGCAGAGCCAGGGAGG 714562 Query 116441 CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAAT 116500 | || ||||| |||| | |||||| || |||||| || || || || || | | Sbjct 714561 CAAGGTTACAGACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCAGAGGT 714502 Query 116501 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 116560 | || || |||||||||| |||||| || || ||| ||| || || ||||||| Sbjct 714501 TGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCATGCGTCCTTGT 714442 Query 116561 AGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCG 116619 | ||||| | || | || ||||| ||||| | || ||| || || | ||| | | || Sbjct 714441 ACAGCATGAAGGGGTTGCCGGTCTCAGTTTGAGCCTCGAGGATGGCGTACCACAACTTCT 714382 Query 116620 GCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC------CTCCTCGTACTTTGTGTAGAGG 116673 | | || || ||| ||| || |||| || ||||||||| ||| | | Sbjct 714381 GAGCCTT---CA-TGGTCTTG---CGACCCTTGCCAAGCTTCTCGTACTTCTCGTATAAG 714329 Query 116674 GCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAG 116732 ||||| ||||| || || ||| || | || || || || | || || | || Sbjct 714328 GCCTCGAACTCCTCGCCGT-AGCAGTCGGCAAGGCCAGGGCACTCGTTGGGGCACATCAG 714270 Query 116733 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792 || ||| | || || ||||||||||||||||||||| || |||||||| || || Sbjct 714269 AGTCCAATCGCCGTTCTTCTCAACCCGCTTCATGAAGAGATCAGGGATCCAAAGGGCTAG 714210 Query 116793 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 116852 ||| ||||| || ||| | ||||| | || || || |||| |||| || || Sbjct 714209 GAAAAGATCGCGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTC 714150 Query 116853 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCC-CTTGC--GACGAC 116908 | || |||||||||||| || || ||||| | |||| | |||| | || | | | Sbjct 714149 GAAGACATCCGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCGGTCGCTTGTTG-C 714091 Query 116909 CAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCAT 116968 || |||||| || || | || || ||| || || || ||||| ||||||| ||| | Sbjct 714090 CACCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGACACCGT 714031 Query 116969 CAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCA 117028 || || || || || ||| ||| |||| | || | ||| || | Sbjct 714030 TGGAGGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATACGGTGAGCGTTGA 713971 Query 117029 TACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCC 117088 ||| ||||| || ||| ||| ||||| || ||| | ||||| || | ||||| | Sbjct 713970 GACCGATACCGCCAGCCATCTTGGAGATCATGGCACACGTCTTGAGAGTGTCATAGATAC 713911 Query 117089 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTG 117148 | ||||| || |||| | | | ||||||||| |||| || ||| || | Sbjct 713910 CCTCGATGCTATCCTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGGGGCTGAGGGG 713851 Query 117149 TACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATC 117206 ||||||||||||| ||||| || | || ||| | ||| | |||| |||||| | Sbjct 713850 TACCAGCGTTGAAAAGGGTGGGCGAAGCATGGGTAAAC--AGCTTGCTGGACATGAGGTT 713793 Query 117207 GTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAA 117266 ||||||||||| |||| |||||| || || || || | || || ||||| | Sbjct 713792 GTAGGTCTCCAGGACACGCTCAATGTCATCGCCCCAGATGCCAACAGACACACGCATGAT 713733 Query 117267 CATGTATTGGGGT 117279 ||||| || ||| Sbjct 713732 CATGTGCTGCGGT 713720 >seq6 Length=1299473 Score = 122 bits (134), Expect = 1e-22 Identities = 303/455 (67%), Gaps = 10/455 (2%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| ||||| ||| |||||||| Sbjct 1188559 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCAT 1188618 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || ||||| | || || | | || | | || | | || ||| Sbjct 1188619 GAAGTCGAAGGGGTTGGTCGACTTGTAGACCTTCTCGTTGCCGAGAGC--GACAAGAAGA 1188676 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 ||||| | ||| |||||||||||| ||| ||||||||||| |||| ||| Sbjct 1188677 CGATCGGCAACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGCAGGGCG 1188736 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || || || || || || |||| ||||||| ||| || || || | |||| | Sbjct 1188737 CAGGGCAGAGCCTCGGTGAGGAACTCCTTCTCGATGGTGACGGCATCAGTGATGATGTCT 1188796 Query 127469 TGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAAC 127525 | || | | | | || | | || | || | || || || || || Sbjct 1188797 TCGATGATCTTCTTGCTAGCACGACCCTTCAGATGAGAGTGGAGCAG--GCA-GGCGAAG 1188853 Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585 || ||| || ||||| ||||| || || || || || |||||| ||| || |||||| Sbjct 1188854 TCAGTGTGAAGGCCCTCATCACGAGAAATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATG 1188913 Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645 || || |||||||| | |||||| || | | ||| | || ||||||||| ||||| Sbjct 1188914 AGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTCA 1188973 Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAAGGA 127680 ||| || || |||| || |||| ||||||||| Sbjct 1188974 ACAGCAGCAAAGGCAACCAGGCGCTGGGCAAAGGA 1189008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613482253263480