Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq6 154 2e-32 >seq6 Length=1299473 Score = 154 bits (170), Expect = 2e-32 Identities = 342/502 (68%), Gaps = 17/502 (3%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| | | ||| || |||||||| |||| ||||| Sbjct 1188574 CTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTT 1188633 Query 159709 CTTC-ACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 || || || ||| |||| |||||||| | || | | || || || || | Sbjct 1188634 GGTCGACTTG-TAGACCTTCTCGTTGCCGAGAGCGACAAGAAGACGATCGGCAACGAACT 1188692 Query 159768 CGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCC 159826 | ||||| || | ||| | ||| |||| || || ||||| ||| || || || Sbjct 1188693 CAATGTA-CTGCTTCATGAGGTCAGAGTTCATGCCGAGCAGGGCGCAGGGCAGAGCCTCG 1188751 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT--CTGCGA-GA-CACGTTC 159882 | || ||||||||||| || ||| || || || | || || ||| || | || Sbjct 1188752 GTGAGGAACTCCTTCTCGATGGTGACGGCATCAGTGATGATGTCTTCGATGATCTTCTTG 1188811 Query 159883 GTACCCCGGCTTGCCCAAAATGTG-GTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCA 159941 || | || | | | ||| | || || ||||| || ||||| ||| | Sbjct 1188812 CTAGCACGACCCTTC--AGATGAGAGTGG------AGCAGGCAGGCGAAGTCAGTGTGAA 1188863 Query 159942 GTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCG 160001 | ||||| || ||||| || | ||||||||| | | | ||||| ||||||| |||||| Sbjct 1188864 GGCCCTCATCACGAGAAATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGGCCACGCT 1188923 Query 160002 GTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAA 160061 |||||||| || |||| ||||| |||||||| || ||||| ||||| || || |||| Sbjct 1188924 TCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTCAACAGCAGCAA 1188983 Query 160062 ACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATT 160121 | || || || | || |||| || | || |||| ||| |||||| ||||||| | Sbjct 1188984 AGGCAACCAGGCGCTGGGCAAAGGACGAGTCCTTGTCCTGGATCCACCGGATGGCCCAGT 1189043 Query 160122 CAGCCTTCTTTGCGATGCACGG 160143 ||||||||||| |||||| || Sbjct 1189044 CAGCCTTCTTTCGGATGCAGGG 1189065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795122867001680