Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq6 154 2e-32
>seq6
Length=1299473
Score = 154 bits (170), Expect = 2e-32
Identities = 342/502 (68%), Gaps = 17/502 (3%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| | | ||| || |||||||| |||| |||||
Sbjct 1188574 CTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTT 1188633
Query 159709 CTTC-ACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767
|| || || ||| |||| |||||||| | || | | || || || || |
Sbjct 1188634 GGTCGACTTG-TAGACCTTCTCGTTGCCGAGAGCGACAAGAAGACGATCGGCAACGAACT 1188692
Query 159768 CGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCC 159826
| ||||| || | ||| | ||| |||| || || ||||| ||| || || ||
Sbjct 1188693 CAATGTA-CTGCTTCATGAGGTCAGAGTTCATGCCGAGCAGGGCGCAGGGCAGAGCCTCG 1188751
Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT--CTGCGA-GA-CACGTTC 159882
| || ||||||||||| || ||| || || || | || || ||| || | ||
Sbjct 1188752 GTGAGGAACTCCTTCTCGATGGTGACGGCATCAGTGATGATGTCTTCGATGATCTTCTTG 1188811
Query 159883 GTACCCCGGCTTGCCCAAAATGTG-GTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCA 159941
|| | || | | | ||| | || || ||||| || ||||| ||| |
Sbjct 1188812 CTAGCACGACCCTTC--AGATGAGAGTGG------AGCAGGCAGGCGAAGTCAGTGTGAA 1188863
Query 159942 GTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCG 160001
| ||||| || ||||| || | ||||||||| | | | ||||| ||||||| ||||||
Sbjct 1188864 GGCCCTCATCACGAGAAATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGGCCACGCT 1188923
Query 160002 GTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAA 160061
|||||||| || |||| ||||| |||||||| || ||||| ||||| || || ||||
Sbjct 1188924 TCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTCAACAGCAGCAA 1188983
Query 160062 ACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATT 160121
| || || || | || |||| || | || |||| ||| |||||| ||||||| |
Sbjct 1188984 AGGCAACCAGGCGCTGGGCAAAGGACGAGTCCTTGTCCTGGATCCACCGGATGGCCCAGT 1189043
Query 160122 CAGCCTTCTTTGCGATGCACGG 160143
||||||||||| |||||| ||
Sbjct 1189044 CAGCCTTCTTTCGGATGCAGGG 1189065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795122867001680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |