Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq8 154 3e-32 seq1388 138 3e-27 seq3070 134 3e-26 seq19 116 9e-21 seq15 98.7 2e-15 >seq8 Length=1068389 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| || || ||||| ||||| ||||| || |||| ||||||||||| || || Sbjct 631830 CGAAGTCGGAGAACCAGGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTT 631771 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||||||||||||||||||||| |||||||| ||||| ||| || Sbjct 631770 CGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGATCCGGGGGAATGCCC 631711 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| |||| ||| || | || || || || | Sbjct 631710 TCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGACTCCACCTCGAGG 631651 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| ||||| || || ||||| || || Sbjct 631650 GTGATAGTCTTACCGGTGAGGGTCTTGACAAAGATCTG 631613 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||||||||| |||||||| |||| ||||||||| | | || | || || Sbjct 631311 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 631252 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||| ||||||||||||||||| || || || ||| Sbjct 631251 TCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCC 631192 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| || || | | || || || | ||||| ||| Sbjct 631191 TGGATCTTCGACTTCACGTTGTCGATAGTATCCGAGGACTCGACCTCAAGGGTGATGGTC 631132 Query 199598 TTACCCGT 199605 || ||||| Sbjct 631131 TTTCCCGT 631124 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| ||||| || || |||||||| |||| |||||| || || || Sbjct 632058 CGAAGACGGAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTG 631999 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| ||||||||||| || || ||||| || ||||||||||| || ||| || Sbjct 631998 CGACCATCCTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGAATGCCC 631939 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| |||||| |||| ||| || | | || || || | Sbjct 631938 TCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGA 631879 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || || || || ||||| || || || Sbjct 631878 GTGATCGTCTTTCCGGTCAGGGTCTTCACGAAGATCTG 631841 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||| || |||||||| || | ||||||||| | | || Sbjct 631602 CGAAGGCGGAGGACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTG 631543 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || || ||||| | |||||||||||||| ||| || Sbjct 631542 CGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATACCC 631483 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| ||||| | | || || || | Sbjct 631482 TCCTTATCCTGGATCTTCGACTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCGAGG 631423 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 ||||| ||||| || ||||| || || || Sbjct 631422 GTGATGGTCTTGCCGGTGAGGGTCTTGAC 631394 Score = 93.3 bits (102), Expect = 1e-13 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993 ||| |||||||||||||||||| | || ||||| | || || | || |||||| |||| Sbjct 631735 ACTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGAACCCTGTCTGACTACAACATCCA 631794 Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||||||||||||||| ||||| ||| | ||||||| Sbjct 631795 GAAAGAGTCTACTCTACACCTGGTTCTCCGACTTCG 631830 >seq1388 Length=1638 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || ||||| ||||| || |||| |||||| || | | || | || || Sbjct 317 AGCACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGACCGTCC 376 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||||||||| |||||||||||| ||| ||||| ||| Sbjct 377 TCAAGCTGCTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCC 436 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || |||||| || | ||| || | | ||| || || | ||||||||| Sbjct 437 TGAATTTTAGTCTTCACATTCTCAATGGTATCCGAGGATTCCACTTCAAGGGTGATCGTC 496 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||||||||| || ||||| Sbjct 497 TTACCAGTCAGAGTTTTCACGAATATTTG 525 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||| || || || ||||| || |||||||||| ||||||||||| || || Sbjct 764 CGAAGACGCAGCACGAGATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGGGTG 823 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || || ||||| || |||||||||||||||||||||||||| || ||| Sbjct 824 CGACCGTCCTCAAGTTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCT 883 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||||||| |||| ||||| | | || || || | Sbjct 884 TCCTTATCCTGAATCTTAGTCTTCACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGA 943 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || || || ||||| || Sbjct 944 GTGATGGTCTTTCCGGTTAAGGTCTTGACGAAAATCTG 981 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| ||||| ||||| || |||| |||||| || | | ||| | || || Sbjct 89 AGCACAAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCC 148 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||||||||||||||| || ||||| ||| Sbjct 149 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCC 208 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| || | ||||| | | ||| || || | || || ||| Sbjct 209 TGAATCTTAGTCTTGACGTTCTCAATAGTGTCGGAGGATTCCACCTCAAGAGTAATGGTC 268 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| ||||| || Sbjct 269 TTTCCAGTAAGGGTCTTCACGAAAATCTG 297 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || || |||||||| |||| ||||||||||| | ||| | || ||| Sbjct 1319 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCT 1378 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| ||||| ||||||||||| ||| ||||| ||| Sbjct 1379 TCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCCGGGGGAATACCTTCCTTGTCC 1438 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || || | || || ||| Sbjct 1439 TGGATCTTGGTCTTGACATTCTCGATGGTGTCGGAAGACTCCACTTCGAGAGTAATAGTC 1498 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||||| ||||| || || Sbjct 1499 TTGCCTGTTAAGGTTTTAACAAAGATCTG 1527 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || || | ||| || ||||| || | ||||||||||| | || | ||||| Sbjct 545 AGTACGAGATGCAAAGTGGATTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCC 604 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || |||||||| |||||||| ||||| ||||| ||||| || ||||| || Sbjct 605 TCGAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCCGGGGGGATACCTTCCTTGTCT 664 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| ||| || | | ||| || || | || || ||| Sbjct 665 TGAATCTTAGTCTTCACGTTCTCGATGGTATCAGAGGATTCGACTTCAAGAGTAATGGTC 724 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || |||||||| || Sbjct 725 TTTCCAGTAAGAGTCTTGACAAAAATCTG 753 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || || |||||||| |||| |||||||| | | ||| | || ||| Sbjct 1091 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCGTCT 1150 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| ||||| || ||||||||||| ||| ||||| ||| Sbjct 1151 TCGAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCCGGGGGAATACCTTCCTTGTCC 1210 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || ||| ||| |||| ||||| | | || || || | ||||| ||| Sbjct 1211 TGAATTTTGGTCTTAACGTTCTCGATAGTGTCGGAGGACTCAACTTCAAGAGTGATGGTC 1270 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || || ||||| || Sbjct 1271 TTTCCGGTTAAGGTCTTGACGAAAATCTG 1299 Score = 91.5 bits (100), Expect = 3e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || ||||||||||| |||||| | || || || | ||| | ||||||||||| ||||| Sbjct 174 CTCATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAACATCCAG 115 Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017 ||||||||||||||||||||||| Sbjct 114 AAAGAGTCTACTCTTCACCTTGT 92 >seq3070 Length=537 Score = 134 bits (148), Expect = 3e-26 Identities = 163/220 (74%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||| || ||||| |||||||| || | ||||||||| | || ||| Sbjct 245 CGAAGACGGAGCACAAGATGTAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTG 186 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||| ||||| |||||||| || |||||||| |||||||| |||||| ||||||| Sbjct 185 CGGTCATCCTCCAGTTGCTTTCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGAATTCCT 126 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATT--CGACGGTGTCTGTTGTTTCTACATCCA 199586 || ||||||||||| |||||| ||| || | | || | || ||||| || | Sbjct 125 TCCTTGTCCTGAATCTTGGTCTTCAC--ATTGCTGATGCTATCGGATGACTCTACTTCGA 68 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || ||||| || || || || Sbjct 67 GAGTGATAGTCTTTCCGGTTAGCGTTTTGACGAAGATCTG 28 >seq19 Length=502728 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||||||||| |||||| |||| ||||||||| || ||| | ||||| Sbjct 172589 AGCACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 172648 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| || |||||||||||||| || || || ||| Sbjct 172649 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 172708 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||||||| Sbjct 172709 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 172768 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || || || Sbjct 172769 TTCCCCGTGAGGGTCTTGACGAAGATCTG 172797 >seq15 Length=666898 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | ||| | ||||| || |||||||| || ||||||| Sbjct 143566 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 143507 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || |||||||||||||| || || || ||||| ||||| ||| || | Sbjct 143506 TCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 143447 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 | | |||||| | | || || || | ||||| ||||| |||||||| || ||||| | Sbjct 143446 CAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 143387 Query 199620 AA 199621 || Sbjct 143386 AA 143385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178872463652951