Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 seq19 116 4e-21 seq15 114 1e-20 seq1388 113 5e-20 seq3070 109 5e-19 seq8 107 2e-18 >seq6 Length=1299473 Score = 127 bits (140), Expect = 2e-24 Identities = 322/482 (67%), Gaps = 12/482 (2%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | ||| ||| | ||| || || ||||||||| Sbjct 1188575 TTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 1188634 Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | |||||| ||| | |||||| || |||| || || | ||||| |||||| Sbjct 1188635 GTCGACTTGTAGACCTTCTCGTTGCCGAG-AG--CGACAAGAAGACGATCGGCAACGAAC 1188691 Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTTC 132800 || ||||| ||| |||| || | || | || ||||| |||| ||||| || || Sbjct 1188692 TCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGCAGGGCGCAG-GGCAGAGCCTC 1188750 Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860 |||||| || | |||||||| ||| || || |||| ||| || | | | | Sbjct 1188751 GGTGAGGAACTCCTTCTCGATGGTGACGGCATCAGTGATGATGTCTTCGATGATCTTCTT 1188810 Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 ||| | || | || ||| | | || ||| || ||||| || | |||||| Sbjct 1188811 GCTAGCACGACCCTTCAGATGAGAGTGGAGCAGGCAGGCGAAGTCAGTGTGAAGGCCCTC 1188870 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 || | ||||| || |||||| ||| |||| ||| ||||||||||| || || ||||| Sbjct 1188871 ATCACGAGAAATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAG 1188930 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||| || |||| || || || ||||||| ||||| || || || || || || Sbjct 1188931 CCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTCAACAGCAGCAAAGGCAAC 1188990 Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTG--CTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 |||||||| | | || | | || ||| ||| |||||| || | ||||| || ||| Sbjct 1188991 CAGGCGCTGGGCAAAGGACGAGTCCTTGTCCTG--GATCCACCGGATGGCCCAGTCAGCC 1189048 Query 133099 TT 133100 || Sbjct 1189049 TT 1189050 Score = 100 bits (110), Expect = 3e-16 Identities = 188/276 (68%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| ||||| ||||| || || | || ||||| | ||||||||| ||| || || Sbjct 1189170 GTAAGTGTCAATGAGTAGGGAGTAGGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAA 1189229 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| || ||||| | ||| || || ||| | || || || || Sbjct 1189230 GCCGTAGAAGCAGCGAGCCTCAGGGATCTGGACCTCGCCGCTGAATCTTTCAACGAGGTT 1189289 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||||||||| || |||||||| ||||||| | ||| || ||| | Sbjct 1189290 CTCGTTGACGATGCCATCAGATGCGGCGAAGAAGGCCAAGATGTGAGAGACGAAGAACTG 1189349 Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 |||| | | ||| ||| | ||| ||| | ||||| ||||| || | |||||| Sbjct 1189350 TTCGTCGGCAGTCAGGCGGTTGTTCCAATCGTGAAGATCCTTCGACAGATCAATCTCCTC 1189409 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||| || || |||||||| || |||||||| Sbjct 1189410 CGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 1189445 >seq19 Length=502728 Score = 116 bits (128), Expect = 4e-21 Identities = 161/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || |||||||| || || |||||| | || || ||| | Sbjct 172803 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 172744 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| || ||| | || Sbjct 172743 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGA 172685 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| || || | || || || ||||| || || | ||||| || | |||||| Sbjct 172684 CCAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTA 172625 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| ||| || || || |||||||| || Sbjct 172624 CAACATCCAGAAGGAGAGC-ACTCTCCACTTGGTGCTCCG 172586 >seq15 Length=666898 Score = 114 bits (126), Expect = 1e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| | || |||||| || | |||| | | Sbjct 143386 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATT 143445 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| | ||||| ||||| || Sbjct 143446 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGACTG 143505 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| ||||| || || | ||||| ||| ||||||||||||||| ||| Sbjct 143506 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACAACATCCAGAAG 143565 Query 38433 G 38433 | Sbjct 143566 G 143566 >seq1388 Length=1638 Score = 113 bits (124), Expect = 5e-20 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || | || || || |||||||| | || || ||| || | Sbjct 985 AATGCAGATTTTCGTCAAGACCTTAACCGGAAAGACCATCACTCTTGAAGTTGAGTCCTC 926 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 ||||| | | |||| | |||| || || | || || || || || ||| | ||| Sbjct 925 CGACACTATCGAGAACG--TGAAGACTAAGATTCAGGATAAGGAAGGCATCCCCCCGGAC 868 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| ||||| | ||| || || || || || |||| |||||||| |||||| Sbjct 867 CAGCAGCGTCTCATCTTCGCTGGTAAGCAACTTGAGGACGGTCGCACCCTGTCTGACTAC 808 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||| | || || ||| | ||||||||| | | ||||| Sbjct 807 AACATCCAAAAGGAATCTACTCTTCATCTCGTGCTGCGTCTTCGCGGCGG 758 Score = 109 bits (120), Expect = 5e-19 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||||||||| ||||| || || || || || |||||| | || || || || | Sbjct 528 ATGCAAATATTCGTGAAAACTCTGACTGGTAAGACGATCACCCTTGAAGTGGAATCCTCG 469 Query 38304 GACAGCGTGCA-AACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | || | | |||| ||||| | ||||| || || ||||| | |||| Sbjct 468 GATACCATTGAGAATG--TGAAGACTAAAATTCAGGACAAGGAAGGTATTCCTCCGGACC 411 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || ||||| | ||| || || ||||| || |||| ||||||||| ||| |||| Sbjct 410 AGCAACGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACCCTCTCCGATTACA 351 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| || || | || || ||| | ||||| ||| Sbjct 350 ACATCCAGAAAGAGTCTACTCTTCATCTTGTGCTCCGT 313 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| | || ||||| || || || |||| || ||| | || Sbjct 1530 ATGCAGATCTTTGTTAAAACCTTAACAGGCAAGACTATTACTCTCGAAGTGGAGTCTTCC 1471 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || |||| ||||| || || |||||| | |||| Sbjct 1470 GACACCATCGAGAATG--TCAAGACCAAGATCCAGGACAAGGAAGGTATTCCCCCGGACC 1413 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || || || | ||| ||||| ||||| || |||| || || || ||||||| Sbjct 1412 AGCAACGTCTTATCTTCGCTGGCAAGCAGCTCGAAGACGGCCGTACTCTTTCTGACTACA 1353 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| | || ||||| | ||||| ||| Sbjct 1352 ACATCCAGAAGGAGTCCACCCTGCACCTTGTGCTCCGT 1315 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || || || || || ||||| || | || || || || | Sbjct 301 AATGCAGATTTTCGTGAAGACCCTTACTGGAAAGACCATTACTCTTGAGGTGGAATCCTC 242 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 ||||| | | |||| | |||| || || | || || || || || ||| | ||| Sbjct 241 CGACACTATTGAGAACG--TCAAGACTAAGATTCAGGATAAGGAAGGCATCCCCCCGGAC 184 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| ||||| | ||| || || ||||| || |||| ||||| || ||| ||| Sbjct 183 CAGCAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTAC 124 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| || || | || || || | ||||| ||| || | || || Sbjct 123 AACATCCAGAAAGAGTCTACTCTTCACCTTGTGCTTCGTCTGCGTGGTGG 74 >seq3070 Length=537 Score = 109 bits (120), Expect = 5e-19 Identities = 160/222 (72%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| |||||||| || || || || ||||| |||| || ||| | Sbjct 22 AAGATGCAGATCTTCGTCAAAACGCTAACCGGAAAGACTATCACTCTCGAAGTAGAGTCA 81 Query 38301 ACCGACAGCGTGCA--AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC 38357 |||| ||| | || || | | |||| || || | ||||| || |||||||| | Sbjct 82 TCCGATAGCAT-CAGCAATG--TGAAGACCAAGATTCAGGACAAGGAAGGAATTCCTCCG 138 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 || || ||||| ||||| | ||||| || || ||||| || || ||||| || |||| Sbjct 139 GATCAGCAGCGCCTCATCTTTGCGGGAAAGCAACTGGAGGATGACCGCACTCTGTCCGAC 198 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| || ||||| | || || ||| | ||||| ||| Sbjct 199 TACAACATTCAGAAGGAGTCTACTCTACATCTTGTGCTCCGT 240 >seq8 Length=1068389 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || || ||||| | || |||||| ||| | Sbjct 631838 ATGCAGATCTTCGTGAAGACCCTGACCGGAAAGACGATCACTCTTGAGGTCGAGTCCAGC 631897 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || || | ||||| ||||| |||||| ||||||| Sbjct 631898 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 631957 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || || || |||||||| || | |||||||| | ||| |||||| Sbjct 631958 CAGCGACTTATCTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTGAGCGATTACAAC 632017 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || || |||| || ||| | | ||||| Sbjct 632018 ATCCAGAAGGAGTCTACCCTTCACCTGGTCCTCCGTCTTCGTGGCGG 632064 Score = 93.3 bits (102), Expect = 4e-14 Identities = 123/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 ||||| || ||||||||| | || |||||| || | || | | | |||| | || Sbjct 631124 ACGGGAAAGACCATCACCCTTGAGGTCGAGTCCTCGGATACTATCGACAACG-TGAAGTC 631182 Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386 || |||| || || ||||| || ||| | ||||| ||||| || || | ||| || || Sbjct 631183 GAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGAAA 631242 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 ||||| || |||| ||||||||| ||||||||||||||| ||||| Sbjct 631243 GCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGA 631290 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313 |||| || || ||||| ||||| ||||||||| |||| || ||| | | |||| | Sbjct 631392 TCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCTGACACTATCG 631451 Query 38314 AAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCA 38373 | | | || || |||| || || ||||| |||||| | ||||| ||||| | | Sbjct 631452 ACAATGTCAAGTCGAAGATCCAGGATAAGGAGGGTATTCCCCCGGACCAGCAGCGCTTGA 631511 Query 38374 TTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433 | | || ||||| ||||| || || | ||||||||| |||||||||||| || |||| Sbjct 631512 TCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATTCAGAAGG 631571 Query 38434 A 38434 | Sbjct 631572 A 631572 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| || || || |||||| |||| || ||| | | Sbjct 631610 ATGCAGATCTTTGTCAAGACCCTCACCGGTAAGACTATCACCCTCGAGGTGGAGTCATCT 631669 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || || | ||||| ||||| |||||| | || || Sbjct 631670 GATACCATCGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCA 631728 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || ||||| || || | || ||||| |||||||| Sbjct 631729 GCAGCGACTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGAACCCTGTCTGACTACAA 631788 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| || || | || || || |||| || || Sbjct 631789 CATCCAGAAAGAGTCTACTCTACACCTGGTTCTCCG 631824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500152461723520