Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1222 459 3e-124 seq13 235 7e-57 seq1613 183 4e-41 >seq1222 Length=2113 Score = 459 bits (508), Expect = 3e-124 Identities = 1098/1652 (66%), Gaps = 39/1652 (2%) Strand=Plus/Minus Query 6518 TAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTT---TTCGCGTACTTTTCATCT 6574 ||||||||||||||||| || || |||| ||| || ||| || | || Sbjct 1733 TAACAGTAGTTTTCGAGGGAGTTGCGGGCTTCGATCTTAGCCTTGGCGGCCT---CGTCC 1677 Query 6575 TCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTC 6634 ||| | || ||||| || |||||||| |||||||| || || | ||| || | || Sbjct 1676 TCAGCCTTGTACTTCTCGGCATCTTGAACCATCTTCTCGATCTGTTCCTTGCTCAGTCGA 1617 Query 6635 CCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694 ||||| || || || || |||||||| | ||||| | ||| || |||||||| Sbjct 1616 CCCTTGTCGTTGGTGATGGTAATCTTGTTCTTCTTACCAGTACTCTTGTCCTCAGCACTG 1557 Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 || |||| |||||| || ||||| | ||| || | || | || || || ||| | Sbjct 1556 ACGTTCAGAATACCGTTAGCATCGATATCAAAGGTGACTTCGATCTGCGGAACACCACGA 1497 Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814 ||||||| |||||||| | | || || | || || | | || ||| | | Sbjct 1496 GGTGCGGGGGGAATACCGGAAAGTTCGAACTTGCCGAGCAGGTTATTGTCCTTGGTGCGA 1437 Query 6815 TTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAG 6874 ||||||||||||| || || | ||| ||| | ||||| || || || ||| Sbjct 1436 GTACGTTCACCTTCGTACACCTGAATGAGCACGCCCGGTTGGTTGTCGGCGTAGGTGGAG 1377 Query 6875 AAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAAT---AACCGGGGTCATA 6931 ||||| || | ||||| | ||||| || || |||| | || ||||| |||| Sbjct 1376 AAGATCTGCTGCTTCTTGGTCGGAATGGTGGTGTTTCGCTTGATGAGAACCG---TCATG 1320 Query 6932 ATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCT 6991 | | |||| ||| || | ||||| |||| || || ||||| | ||| | || ||| Sbjct 1319 ACAGCACCGGCAGTCTCAATACCAAGCGACAAGGGAGTGACGTCAAGGAGAAGCAAGTCC 1260 Query 6992 TGAACAGATTCGTTCCCT----TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTA 7047 || | | |||| ||||| | | ||||| || ||||| | || ||||| Sbjct 1259 TG----GGTCTTTTCCGAAGTGTCACCAGCAAGAATGGCAGCCTGGACAGCAGCTCCGTA 1204 Query 7048 TGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGA 7107 ||| || ||||| || ||||| || | || ||||| || ||||| || | ||| Sbjct 1203 TGCCACAGCCTCGTCCGGGTTGATGTTCTTGCAAAGTTCCTTGCCGTTGAAGAAGTCCAC 1144 Query 7108 TAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCAC 7167 | | || | || ||||| || || |||||||||||||| || || || | || Sbjct 1143 AAGGAGGCTCTGCACCTTGGGGATACGAGTAGATCCACCGACCAACACAATGTCGTCGAC 1084 Query 7168 TTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACG 7227 | | || |||||| ||||| ||||| ||||| || || |||| | | Sbjct 1083 ATCAGCCTTCGGGATCTTGGAGTCACGAAGCACCTTTTCCACTGGCTCCAGAGTACCCCT 1024 Query 7228 GAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAAC 7287 |||||| ||||| || |||||||| || ||||| || | ||||| ||||| ||| Sbjct 1023 GAACAAATCCATGCAGAGTTCCTCGAACTTGGCACGAGTGACGGATGAGTAGAAGTCAGT 964 Query 7288 GCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTT 7347 || ||||| | || ||||| || ||||| | |||| | || || ||| ||||| Sbjct 963 TCCTTCGTAGAGAGAGTCAATCTCGATGGTGGCCTGTGTGGCCGCGGACAACTGGCGCTT 904 Query 7348 TGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTT 7407 || ||||| ||| || || | ||| |||| || ||| | ||| || || || || || Sbjct 903 GGCACGCTCGCACTGGGTGCGGAGACGGCGAACGGAACGAGCGTTTCCAGAGATGTCCTT 844 Query 7408 CTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTT 7466 ||| | || | |||||||| |||| |||||| | | | || || || | Sbjct 843 CTTGTACTTTCTCTTAAACTCGTTCA-TGAAGTGGTTGACCATACGGTTGTCAAAGTCCT 785 Query 7467 CACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGT 7526 |||| || | ||| || || || || || || || |||||||||||||| |||||||| Sbjct 784 CACCCCCAAGGTGAGTGTCACCAGCAGTAGCCTTCACTTCAAAGATACCGTCTTCAATGG 725 Query 7527 TTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC-- 7584 | | | || ||||| || || ||||| |||| ||||||||||| || ||| | || Sbjct 724 TGAGGAGGGAGACATCGAAAGTTCCACCTCCCAAATCAAAAATGAGAACATTCCTCTCAC 665 Query 7585 --GTCGTCTTT--------GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | | || ||| | ||||| || || || || || || || | Sbjct 664 GAGCAGTGTGTCCACCCGCCTTGCGATCCAAGCCGTAGGCAATGGCAGCGGCAGTAGGCT 605 Query 7635 CATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 | || || |||| | ||||| || | |||||||| || | || || || || || | Sbjct 604 CGTTGATGATACGGGAGACA-TTGATACCAGCAATGGTGCCAGCGTCCTTGGTGGCCAGA 546 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 ||||| || || || |||||||||||||| || ||||| ||| | | | || ||| || Sbjct 545 CGTTGAGAGTCATTGAAGTAGGCCGGGACAGTGACGACGGCGGACTTAATTTGCTTTCCA 486 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 || || ||||| |||| || ||||| ||||| |||||||| | ||| || ||||| | Sbjct 485 AGGTAAGATTCGGCGACGTCCTTCATCTTGGTGAGAACCATGGCTGAGATTTCTTCCGGG 426 Query 7814 GCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873 | || ||| || || || | || | || ||| || || || | Sbjct 425 GAGAAGCTCTTCTGGTCGCCCTTGTAGGTGACCTGAACGTAGGGCTTGTCGCCATCCTTC 366 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 |||| ||||| | || | | || || ||| ||||| ||| || || Sbjct 365 TGGATGACCTTGAAGGAGAAGTGCTTGATGTCGGACTGGACGGAGGCGTCGGAGAAGCGA 306 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | ||||| |||||||| || || || || ||||| | ||||| ||||| ||||||| Sbjct 305 CGGCCGATGAGACGCTTGGCGTCGAAGACGGTGTTGTAAGGGTTGATGGCGACTTGGTTC 246 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || ||||| ||||||||||| || | | || || || |||||||| || ||||| Sbjct 245 TTGGCGGCGTCTCCGATAAGACGCTC---ACTGTCTGTGAAGGCGACGTAGGACGGGGTG 189 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 |||| || || |||||||| || || ||||| ||||||||||||||||| ||||||||| Sbjct 188 GTTCTGTTTCCCTGGTCGTTTGCGATGATTTCGACGCGGTCGTTTTGCCACACGCCGACG 129 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||||| || || || || | ||| |||||||| Sbjct 128 CACGAGTAGGTGGTACCGAGATCGATACCGAT 97 >seq13 Length=694022 Score = 235 bits (260), Expect = 7e-57 Identities = 432/630 (69%), Gaps = 6/630 (1%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 409561 ATCGAAGTCCTCACCACCCAAGTGGGTGTCACCAGCGGTGGACTTGACCTCGAAGATACC 409502 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | | | || ||||| || ||||||||||| || || || || || || Sbjct 409501 CTCCTCAATGGTGAGGAGAGACACATCGAAGGTACCACCACCAAGATCGAAGATCAGGAC 409442 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| || | || | ||||| || |||||||| ||||| || || || || || || Sbjct 409441 GTTGCGCTCACCCTCGATCTTCTTGTCAAGACCGTAGGCGATGGCGGCAGCGGTGGGCTC 409382 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 ||||| || || || ||| ||||| ||||| | ||||| || || || || || Sbjct 409381 GTTAATGATTCGCAGGACGTTGAGGCCGGCAATGAGACCAGCATCCTTGGTAGCCTGACG 409322 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| |||||||| ||||| || || || |||| |||| ||| |||||| Sbjct 409321 CTGGCTGTCGTTGAAGTAGGCGGGGACAGTGACAACGGCGTTGTTGACAGTCTCACCGAG 409262 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || | || ||| | || ||| ||||| || | ||| || |||||||| || | | Sbjct 409261 GTAGGCCTCGGCGGTCTCGCGCATCTTGGTGAGGATCATGGAAGAAATCTCCTCGGGGGT 409202 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 || ||| || || || || || || || | ||||| || |||| | | Sbjct 409201 GAAGGTCTTCTGCTCGCCCTTGAACTCGACCTCGACGATGGGCTT-GCCGC--CCTTGTC 409145 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 ||| | ||| | | | | ||||||||| | ||||||| || | |||||| | Sbjct 409144 GATGATCTTGAAGGGGAAGTGCTTCATATCGGCCTGGACCTCAGCATCGGCAAACTTGCG 409085 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||||| | ||||| || || || || ||||| | |||||||||||| |||||||| Sbjct 409084 GCCGATCAATCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTT 409025 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || || || ||||| || | || || || ||||| | || || || || Sbjct 409024 GGCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAAGGAAGGAGTGGT 408968 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTC 8085 ||| || || |||||||| ||||| || || Sbjct 408967 TCGGTTGCCCTGGTCGTTGGCAATGATATC 408938 Score = 163 bits (180), Expect = 4e-35 Identities = 367/545 (67%), Gaps = 15/545 (3%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| |||||||| ||||| | ||| || | || ||| | | || Sbjct 2654 AGGTCCTCGAAACGGGCACGGGTGATGGACATGGTGAAGTCCTCACCATCGAAGAGAGAG 2713 Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 ||||| |||||||| | || || || | || | || ||||| || ||||| || | Sbjct 2714 TCAATCTCAATGGTGGCCTGGGCACCGCTG--GACAGGGTACGCTTGGCACGCTCGCAAG 2771 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | ||||| | ||| || || ||||| | | ||||| | ||| ||||| || || Sbjct 2772 CAGTTCGGAGACGGCGGAGAGCACGGGCATCTCCGGAGAGATCCTTCTTGCTCTTGCGGG 2831 Query 7422 TAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 ||||| | | |||| |||| | || | | |||||||| | |||||||||||| Sbjct 2832 AGAACTCCTTCTTGCAGTGCTCGA-GCAGGTTGGTGTCGAAATCCTGACCACCCAAGTGG 2890 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || || || || ||||| |||| ||| || | ||||| | | || ||| Sbjct 2891 GTGTCACCAGCAGTGGCCTTGACGGTGAAGACACCACCCTGGATGTTCAGGAGGGAGACA 2950 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT- 7599 || || ||||||||||| || || | || || ||||| || | || | | ||| Sbjct 2951 TCGAAAGTACCACCACCGAGATCGTAGATCAGGACGTTGCGCTC--CTTC-TCGGACTTA 3007 Query 7600 -----ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 | |||||||||| |||||||| || || || || || || || ||||| || | Sbjct 3008 CCAGCACCGAGACCGTAGGCGATAGCGGCAGCGGTGGGCTCGTTGATGATACGGAGGACG 3067 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || || || || |||| | ||||| || || || ||||| || ||||| |||||| Sbjct 3068 TTGAGACCGGCGATAGAACCGGCATCCTTGGTGGCCTGTCGCTGGTTGTCGTTGAAGTAG 3127 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || ||||| || | ||| || | | ||| ||||| || || | | || || || || Sbjct 3128 GCAGGGACAGTGATGACGGCCTTCTCGACCTTCTTGCCAAGCTTGGTCTCGGCAATCTCC 3187 Query 7775 TTCAT 7779 ||||| Sbjct 3188 TTCAT 3192 >seq1613 Length=1251 Score = 183 bits (202), Expect = 4e-41 Identities = 461/692 (67%), Gaps = 18/692 (3%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||| || ||||| || ||| || ||||| |||| || Sbjct 902 TCAAAGTCCTCACCACCCAGATGGGTATCTCCATTGGTAGCAAGCACTTCGAAGACGCCG 843 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | | ||||| || || ||||| |||| || || | | | Sbjct 842 TCGTCGATGGTAAGAAGTGTGACATCGAAAGTTCCACCTCCCAAATCGAAGACCAAAATA 783 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | || | | |||||| |||||||| || ||||| || || || || ||| Sbjct 782 TTCTTCTCACCCTTCTTGTTC------AGACCGTATGCAATAGCAGCGGCAGTAGGCTCA 729 Query 7637 TTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || |||||||| | |||| || || || |||||||| |||| || || ||||| || || Sbjct 728 TTGATAATACGCATGACA-TTGAGTCCTGCAATAGTACCCGCGTCCTTTGTCGCCTGGCG 670 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| | || || ||||| |||||||| || || || || | | | |||| || || || Sbjct 669 TTGAGCGTCATTGAAGTAAGCCGGGACAGTGACAACAGCATTCTTAACTTCTTTTCCAAG 610 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 ||| || ||| | | ||||| || || ||||| | || |||| || | | Sbjct 609 ATATTCCTCAGCGGTTTTCTTCATCTTTCCCAGCACCATAGCGGAGATCTGCTCGGGGGA 550 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 ||| ||| ||| || || | |||| |||||||| || || | | | Sbjct 549 AAAGGTCTTCTCTTCTCCCTTGACGTCAATAGAGATCATGGGCTTGTC---ACCCTGGCT 493 Query 7876 GATAACCTT-ATACGACCAATCTTTCATATCGTCTTGGACCTGTTG-GTCCGAAAACTTT 7933 || || ||| | | || || ||| | | || || || || | ||| |||| Sbjct 492 GACAATCTTGAAAGGAAGAAGCTT-CTTGTCACGCTGAACG-GTGGCGTCATTGTACTTG 435 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | ||||| ||||| || | ||||| || ||||| ||||||||||| | |||||| Sbjct 434 CGACCGATGAGACGTTTGACGTCAAAGACGGTGTTGACAGGGTTCATGGCGGCCTGGTTC 375 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || ||||| || || ||||| || | | | || || |||||||| || ||||| Sbjct 374 TTTGCGGCGTCGCCAATGAGACGCTCTTCA---GCAGTGAAGGCGACGTAGGAAGGGGTG 318 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 ||||||| || ||||| || || ||||| || || | |||||||| |||||| || Sbjct 317 ATTCGATTTCCCTGGTCATTGGCGATAATCTCGACCTGACCGTTTTGCATGACGCCCACA 258 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGAT 8145 || || || || ||||||| ||| || ||||| Sbjct 257 CAAGAGTATGTAGTTCCTAGATCGATGCCGAT 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635106973912520