Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq5 255 7e-63
seq6 131 2e-25
>seq5
Length=1316942
Score = 255 bits (282), Expect = 7e-63
Identities = 926/1432 (65%), Gaps = 29/1432 (2%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||||| || | | || ||| || || || ||||| |||
Sbjct 713721 CCGCAGCACATGATCATGCGTGTGTCTGTTGGCATCTGGGGCGATGACATTGAGCGTGTC 713780
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731
||||||| ||| || |||||| | |||| | ||| || | || ||||| |||
Sbjct 713781 CTGGAGACCTACAACCTCATGTCCAGCAAGCTGTTTACCCATGCTTCGCCCACCCTTTTC 713840
Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791
||||||||||| || ||||| |||| || ||||| ||| | |||||||||
Sbjct 713841 AACGCTGGTACCCCTCAGCCCCAGCTGTCTTCCTGCTTCCTGGTTGACATGAAGGAGGAT 713900
Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851
||| | || || || | |||||||| |||||| ||||| ||| ||||||
Sbjct 713901 AGCATCGAGGGTATCTATGACACTCTCAAGACGTGTGCCATGATCTCCAAGATGGCTGGC 713960
Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911
|||||||| | || || | || | |||| ||| ||| ||||| ||
Sbjct 713961 GGTATCGGTCTCAACGCTCACCGTATCCGTGCCACTGGCTCTTACATTGCCGGTACCAAC 714020
Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971
||| || | ||| | ||||| ||||| || || || ||| ||| || || || ||
Sbjct 714021 GGTACCTCCAACGGTGTCATTCCCATGCTCCGTGTCTTCAACAACACTGCTCGATACGTC 714080
Query 111972 AACCAAGCTGGGCGTC--GCAA--GGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 112027
|||| | ||| | | || | ||| || |||| |||| || ||||| ||||||||
Sbjct 714081 GACCAGGGTGG-CAACAAGCGACCGGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGC 714139
Query 112028 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCG 112087
|||| || | |||||||| || |||| ||||| || | || |||| || |||
Sbjct 714140 GGATGTCTTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCCCG 714199
Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147
|||||| ||| || || ||||| || ||||||||||||||| | |||||| ||| ||
Sbjct 714200 CGATCTTTTCCTAGCCCTTTGGATCCCTGATCTCTTCATGAAGCGGGTTGAGAAGAACGG 714259
Query 112148 CAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGA 112207
| ||||| |||| | || || || || || || || |||| | || |||||
Sbjct 714260 CGATTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTTGCCGACTGCTACGGCGAGGA 714319
Query 112208 GTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGTGCCA 112265
||| || ||| | ||| |||||||| |||| | | | | | || ||| ||
Sbjct 714320 GTTCGAGGCCTTATACGAGAAGTACGA-GAAGCTTGGCAAGGGTC-GCAAGACCATGAAG 714377
Query 112266 GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATAT 112324
||| | || | ||||| | || || ||| || ||||||| ||||| || | || | ||
Sbjct 714378 GCT-CAGAAGTTGTGGTACGCCATCCTCGAGGCTCAAACTGAGACCGGCAACCCCTTCAT 714436
Query 112325 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 112384
||| ||||| ||||| || |||| ||||| || || ||||| |||| ||| ||
Sbjct 714437 GCTGTACAAGGACGCATGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGCAG 714496
Query 112385 TTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAA 112444
||||||||||| || || ||| | || | | | |||||| ||||| |||||
Sbjct 714497 CTCCAACCTCTGCACTGAGATCATTGAGTACTGTGCCCCTGATGAGGTCGCTGTCTGTAA 714556
Query 112445 CCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTGATTAT 112502
||| || || | ||||| || || ||| || | | | || | | | | || |
Sbjct 714557 CCTTGCCTCCCTGGCTCTGCCTTCGTTTGTCGA-CTACA-ACGAGGGCTGCTACGACTTC 714614
Query 112503 GAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGA 112562
| || || |||||||| || | || ||| | |||| | || ||
Sbjct 714615 AAGAAGCTGCACGAAGTCACCCAGGTCGTTGTCCGCAACTTGAACAAGATCATCGACGTC 714674
Query 112563 AATTTTTACCCCG---TTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619
|| ||||||| ||||| ||||| || || ||| | ||| | || |||||
Sbjct 714675 AACCACTACCCCGTCATTGAG---GCTCGCAACAGCAACATGCGCCACAGACCCATTGGC 714731
Query 112620 CTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGAC 112679
| |||||||| ||||| || |||| ||| | | |||| | || || |||
Sbjct 714732 GTTGGTGTCCAGGGTCTTGCCGATGCCTTCCTCGCTCTTCGCATGCCCTTCGAGTCCCCT 714791
Query 112680 GAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCG 112739
|| || || | || || ||||||||||| || || ||||| || || ||
Sbjct 714792 GAGGCTCGTGAGCTGAACAAGCAGATATTTGAGACCATCTACCACGCTGCCCTGACTGCC 714851
Query 112740 AGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 112799
| || | || ||| | || || || |||||| |||| ||||| |||||
Sbjct 714852 TCCGTGCAGCTCGCCAAGGAGCAGGGCCCCTACTCCACCTTTAAGGGCTCTCCCGCTTCT 714911
Query 112800 CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC----AAGCTTCACTACGACTG 112855
| || | ||||| ||||| |||| |||| |||| || | ||| | |||||
Sbjct 714912 GAGGGCATCCTTCAGTTTGACATGT-GGAACGTGAAGCCCTCTGACCTT---TGGGACTG 714967
Query 112856 GGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915
||| ||||| || | |||||||| | || ||||| ||||| | | | || ||
Sbjct 714968 GGAGACTCTCCGTGAGCAGGTCAAGGAGCATGGCCTTCGCAACAGCTTGCTCCTCGCCCC 715027
Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975
||||| || ||| || | || ||| | || || || ||||||||||| ||||| ||
Sbjct 715028 CATGCCTACGGCCAGTACTTCGCAGATCCTAGGCAACAACGAATGCTTTGAGCCCTATAC 715087
Query 112976 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027
| ||||| || | | | | ||| || || ||||| | ||||||||
Sbjct 715088 CTCAAACATTTACCAGCGCCGTGTCCTGGCTGGTGAGTTCCAGGTTGTCAAC 715139
>seq6
Length=1299473
Score = 131 bits (144), Expect = 2e-25
Identities = 160/213 (75%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168
|||||| || || | |||||| || || ||||| || |||| | | |||| | | |
Sbjct 1189069 AGTTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGGTGGATCCAGGACAAGGACTC 1189010
Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228
|| ||||||| |||| || | || ||||| ||||||||||||||||||| |||
Sbjct 1189009 GT-CCTTTGCCCAGCGCCTGGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTG 1188951
Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287
|||| ||| | || | |||||||||||||| || |||||||| || || |||||||
Sbjct 1188950 CCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCC 1188892
Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320
|||||||| || |||||||| ||||| || |||
Sbjct 1188891 AACGAGCTGATTTCTCGTGATGAGGGCCTTCAC 1188859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620717159062160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |