Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 255 7e-63 seq6 131 2e-25 >seq5 Length=1316942 Score = 255 bits (282), Expect = 7e-63 Identities = 926/1432 (65%), Gaps = 29/1432 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || | | || ||| || || || ||||| ||| Sbjct 713721 CCGCAGCACATGATCATGCGTGTGTCTGTTGGCATCTGGGGCGATGACATTGAGCGTGTC 713780 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 ||||||| ||| || |||||| | |||| | ||| || | || ||||| ||| Sbjct 713781 CTGGAGACCTACAACCTCATGTCCAGCAAGCTGTTTACCCATGCTTCGCCCACCCTTTTC 713840 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||||||||| || ||||| |||| || ||||| ||| | ||||||||| Sbjct 713841 AACGCTGGTACCCCTCAGCCCCAGCTGTCTTCCTGCTTCCTGGTTGACATGAAGGAGGAT 713900 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 ||| | || || || | |||||||| |||||| ||||| ||| |||||| Sbjct 713901 AGCATCGAGGGTATCTATGACACTCTCAAGACGTGTGCCATGATCTCCAAGATGGCTGGC 713960 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911 |||||||| | || || | || | |||| ||| ||| ||||| || Sbjct 713961 GGTATCGGTCTCAACGCTCACCGTATCCGTGCCACTGGCTCTTACATTGCCGGTACCAAC 714020 Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971 ||| || | ||| | ||||| ||||| || || || ||| ||| || || || || Sbjct 714021 GGTACCTCCAACGGTGTCATTCCCATGCTCCGTGTCTTCAACAACACTGCTCGATACGTC 714080 Query 111972 AACCAAGCTGGGCGTC--GCAA--GGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 112027 |||| | ||| | | || | ||| || |||| |||| || ||||| |||||||| Sbjct 714081 GACCAGGGTGG-CAACAAGCGACCGGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGC 714139 Query 112028 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCG 112087 |||| || | |||||||| || |||| ||||| || | || |||| || ||| Sbjct 714140 GGATGTCTTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCCCG 714199 Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147 |||||| ||| || || ||||| || ||||||||||||||| | |||||| ||| || Sbjct 714200 CGATCTTTTCCTAGCCCTTTGGATCCCTGATCTCTTCATGAAGCGGGTTGAGAAGAACGG 714259 Query 112148 CAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGA 112207 | ||||| |||| | || || || || || || || |||| | || ||||| Sbjct 714260 CGATTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTTGCCGACTGCTACGGCGAGGA 714319 Query 112208 GTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGTGCCA 112265 ||| || ||| | ||| |||||||| |||| | | | | | || ||| || Sbjct 714320 GTTCGAGGCCTTATACGAGAAGTACGA-GAAGCTTGGCAAGGGTC-GCAAGACCATGAAG 714377 Query 112266 GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATAT 112324 ||| | || | ||||| | || || ||| || ||||||| ||||| || | || | || Sbjct 714378 GCT-CAGAAGTTGTGGTACGCCATCCTCGAGGCTCAAACTGAGACCGGCAACCCCTTCAT 714436 Query 112325 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 112384 ||| ||||| ||||| || |||| ||||| || || ||||| |||| ||| || Sbjct 714437 GCTGTACAAGGACGCATGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGCAG 714496 Query 112385 TTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAA 112444 ||||||||||| || || ||| | || | | | |||||| ||||| ||||| Sbjct 714497 CTCCAACCTCTGCACTGAGATCATTGAGTACTGTGCCCCTGATGAGGTCGCTGTCTGTAA 714556 Query 112445 CCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTGATTAT 112502 ||| || || | ||||| || || ||| || | | | || | | | | || | Sbjct 714557 CCTTGCCTCCCTGGCTCTGCCTTCGTTTGTCGA-CTACA-ACGAGGGCTGCTACGACTTC 714614 Query 112503 GAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGA 112562 | || || |||||||| || | || ||| | |||| | || || Sbjct 714615 AAGAAGCTGCACGAAGTCACCCAGGTCGTTGTCCGCAACTTGAACAAGATCATCGACGTC 714674 Query 112563 AATTTTTACCCCG---TTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619 || ||||||| ||||| ||||| || || ||| | ||| | || ||||| Sbjct 714675 AACCACTACCCCGTCATTGAG---GCTCGCAACAGCAACATGCGCCACAGACCCATTGGC 714731 Query 112620 CTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGAC 112679 | |||||||| ||||| || |||| ||| | | |||| | || || ||| Sbjct 714732 GTTGGTGTCCAGGGTCTTGCCGATGCCTTCCTCGCTCTTCGCATGCCCTTCGAGTCCCCT 714791 Query 112680 GAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCG 112739 || || || | || || ||||||||||| || || ||||| || || || Sbjct 714792 GAGGCTCGTGAGCTGAACAAGCAGATATTTGAGACCATCTACCACGCTGCCCTGACTGCC 714851 Query 112740 AGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 112799 | || | || ||| | || || || |||||| |||| ||||| ||||| Sbjct 714852 TCCGTGCAGCTCGCCAAGGAGCAGGGCCCCTACTCCACCTTTAAGGGCTCTCCCGCTTCT 714911 Query 112800 CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC----AAGCTTCACTACGACTG 112855 | || | ||||| ||||| |||| |||| |||| || | ||| | ||||| Sbjct 714912 GAGGGCATCCTTCAGTTTGACATGT-GGAACGTGAAGCCCTCTGACCTT---TGGGACTG 714967 Query 112856 GGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915 ||| ||||| || | |||||||| | || ||||| ||||| | | | || || Sbjct 714968 GGAGACTCTCCGTGAGCAGGTCAAGGAGCATGGCCTTCGCAACAGCTTGCTCCTCGCCCC 715027 Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975 ||||| || ||| || | || ||| | || || || ||||||||||| ||||| || Sbjct 715028 CATGCCTACGGCCAGTACTTCGCAGATCCTAGGCAACAACGAATGCTTTGAGCCCTATAC 715087 Query 112976 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027 | ||||| || | | | | ||| || || ||||| | |||||||| Sbjct 715088 CTCAAACATTTACCAGCGCCGTGTCCTGGCTGGTGAGTTCCAGGTTGTCAAC 715139 >seq6 Length=1299473 Score = 131 bits (144), Expect = 2e-25 Identities = 160/213 (75%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168 |||||| || || | |||||| || || ||||| || |||| | | |||| | | | Sbjct 1189069 AGTTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGGTGGATCCAGGACAAGGACTC 1189010 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 || ||||||| |||| || | || ||||| ||||||||||||||||||| ||| Sbjct 1189009 GT-CCTTTGCCCAGCGCCTGGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTG 1188951 Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 |||| ||| | || | |||||||||||||| || |||||||| || || ||||||| Sbjct 1188950 CCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCC 1188892 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| || |||||||| ||||| || ||| Sbjct 1188891 AACGAGCTGATTTCTCGTGATGAGGGCCTTCAC 1188859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620717159062160