Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq16 118 1e-21 seq1 111 2e-19 >seq16 Length=594729 Score = 118 bits (130), Expect = 1e-21 Identities = 184/263 (70%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 11735 CGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGG 11794 |||||||||| || || ||||| ||||||||||| || || |||||| |||| | Sbjct 133970 CGAAAAGTTCGCGAACTCGCTTGGCTCCAACACCAACAAAGATCTCATCGAACTCGCTAC 134029 Query 11795 CAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854 |||| | | |||||| ||| | |||||||||| |||||| || || ||||||| Sbjct 134030 CAGACATGTAGAAGAAGGGGACACCGGCTTCACCAGCGACGGCTCGTGCAAGAAGAGTCT 134089 Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAA 11914 | || || ||||| | ||| |||||||| | || ||| | ||||||||| || Sbjct 134090 TTCCAGTTCCAGGAGGGCCAACGAGAAGGACACCCTTGGGCAGCTTGGCACCGAGGTCAG 134149 Query 11915 AGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGT 11974 | | || || |||||||| || || |||| || | ||| ||||||||||| || Sbjct 134150 TGAACTTTTCGGGGTTCTTGAGAAACTCAACAACTTCTTGAAGCTCCTCCTTGGCCTCGT 134209 Query 11975 CGATACCCTCAACATCGGTGAAA 11997 | ||| | ||||| ||||| Sbjct 134210 CACAACCGTGGACATCATTGAAA 134232 >seq1 Length=2087327 Score = 111 bits (122), Expect = 2e-19 Identities = 290/432 (67%), Gaps = 24/432 (6%) Strand=Plus/Plus Query 11536 TCAAGAATATCGACACGGTTTGTAGCGGCAATGACTACAATGCCAGT-CTCAT-TGTCGA 11593 || || ||||| | ||||| ||| |||| | || |||| || || | | | ||| || Sbjct 1363680 TCGAGCATATCCGCTCGGTTGGTACCGGCCAAAACGACAA--CCTGTTCCCGTGTGTTGA 1363737 Query 11594 AACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCA 11653 | |||||||| || || |||| |||||||| || ||| ||||| |||||| | || Sbjct 1363738 ATCCGTCCATCTCGGTAAGAATCTGGTTGAGGGTGGCTTCTCGCTCGTCGTTGCCGC-CA 1363796 Query 11654 TACCACCTGCCGAACGCTTCTTAC---------CGACAGCGTCAATCTCATCGATGAATA 11704 | | | | ||| | || || || ||| || || || || || ||||| | Sbjct 1363797 AATCCCTTTCCG--CTCTCCTGACGCGCTCGGCCGATGGCATCGATTTCGTCAATGAAGA 1363854 Query 11705 CGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAA 11764 ||| || ||| ||| || ||| |||| | || || || || | |||| Sbjct 1363855 TGATGCAGGGTGCGTTCTTTCGGCCCTCGGCGAACAAGTCTCGCACTCGAGAAGGGCCAA 1363914 Query 11765 CACCTACGAACATCTCAACGAAGTTTGCGGCA-GAACACTGAATGAAGGGAACATTAGAC 11823 |||| ||||||||||| ||||| | | || || ||||| ||||||||| ||| Sbjct 1363915 CACCCACGAACATCTCCACGAACTCGGAACCACTCACGCTGAA-GAAGGGAACGCCCGAC 1363973 Query 11824 TCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883 || || || |||| ||| || || |||||||| |||||||| | || || || | Sbjct 1363974 TCGCCGGCCGTGGCCTTAGCAAGCAGTGTCTTACCAGTACCAGGAGGGCCGGCAAGGATT 1364033 Query 11884 GCGCCACGGGGGATCTTGGCACC--ACTTC-CAAAGTAGCGCTCAGGCTTCTTGAGGAAG 11940 ||||| ||||| |||||||| || |||| |||| | ||| |||| |||||||||| Sbjct 1364034 GCGCCTCGGGGAATCTTGGCTCCCAGCTTCTCAAACT---TCTCGGGCTGCTTGAGGAAG 1364090 Query 11941 TCCACAATCTCC 11952 |||| |||| Sbjct 1364091 CTGACAAACTCC 1364102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588952050763400