Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq5 230 3e-55
seq6 111 2e-19
seq16 89.7 6e-13
>seq5
Length=1316942
Score = 230 bits (254), Expect = 3e-55
Identities = 1014/1583 (64%), Gaps = 43/1583 (3%)
Strand=Plus/Minus
Query 105752 ATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGA 105811
|| |||||||| || ||| ||| |||||||||| | || || | | ||| | ||
Sbjct 715282 ATCTCCCACACAGTCTTGTACAGAGACTTGATATCAGCGGGAATGTTGGGGATGTCCTGG 715223
Query 105812 ATTGAACCCCCCGCCTTGACCATGA---GATCCTTCATATCCTTGGACCA-AAGACCA-A 105866
|| ||||| ||| | | | |||| | | |||||| | | ||||| ||| ||| |
Sbjct 715222 ATGGAACCACCCTC---GGCAATGATTCGGTTCTTCATGGCATCAGACCACAAGCCCATA 715166
Query 105867 TCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTC 105926
|| || || || |||| ||| |||||||| | ||||| || || ||| |
Sbjct 715165 TCGACT--AGGTCCTTGAGGAGCCAGGGGTTGACAACCTGGAACTCACCAGCCAGGACAC 715108
Query 105927 TTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTG 105986
| | | || ||||| | || ||||| ||||||||||| || || || | ||| || |
Sbjct 715107 GGCGCTGGTAAATGTTTGAGGTATAGGGCTCAAAGCATTCGTTGTTGCCTAGGATCTGCG 715048
Query 105987 CGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGA 106046
|| ||| || ||||| || || | | | ||||| ||||| || | |||||||
Sbjct 715047 AAGTACTGGCCGTAGGCATGGGGGCGAGGAGCAAGCTGTTGCGAAGGCCATGCTCCTTGA 714988
Query 106047 TGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATC 106104
| || |||| |||||||| | | | || || ||||| |||| |||| ||
Sbjct 714987 CCTGCTCACGGAGAGTCTCCCAGTCCCAAAGGTCAGAG-GGCTTCACGTTCC-ACATGTC 714930
Query 106105 AAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGC 106164
||| ||||| | || | || | |||||| |||| ||| || |||| || || |
Sbjct 714929 AAACTGAAGGATGCCCTCAGAAGCGGGAGAGCCCTTAAAGGTGGAGTAGGGGCCCTGCTC 714870
Query 106165 TTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 106223
| || | | ||| | || ||||| ||||| || ||||| ||||| || |
Sbjct 714869 CTTGGCGAGCTGCACGGAG-GCAGTCAGGGCAGCGTGGTAGATGGTCTCAAATATCTGCT 714811
Query 106224 CATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 106283
|||| ||| || ||| || || || | ||| | || |||| |
Sbjct 714810 TGTTCAGCTCACGAGCCTCAGGGGACTCGAAGGGCATGCGAAGAGCGAGGAAGGCATCGG 714751
Query 106284 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 106343
| ||||| || ||||| | ||||| |||||||| ||||| || || | ||| || ||
Sbjct 714750 CAAGACCCTGGACACCAACGCCAATGGGTCTGTGGCGCATGTTG--CTGTTGCG-AGCCT 714694
Query 106344 CAA---CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTG 106400
||| |||| || || ||| |||| ||| | || | ||| | || |
Sbjct 714693 CAATGACGGGGTAGTGGTTGACGTCGATGATCTTGTTCAAGTTGCGGACAACGACCTGGG 714634
Query 106401 TGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAA 106460
||| ||| || || || | | || | || | | | |||| || || |
Sbjct 714633 TGACTTCGTGCAGCTTCTTGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAACGAAGGCA 714574
Query 106461 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 106520
| || | || || | || || ||||| |||||| | |||||| | || |
Sbjct 714573 GAGCCAGGGAGGCAAGGTTACAGACAGCGACCTCATCAGGGGCACAGTACTCAATGATCT 714514
Query 106521 CTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGC 106580
| || || | |||||| || || || |||| ||||| ||||| ||||| |||||
Sbjct 714513 CAGTGCAGAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGC 714454
Query 106581 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCT 106640
| || |||||||| |||||| |||| | || ||||| || || | || ||| || || |
Sbjct 714453 ATGCGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCAGTTTGAGCCTCGAGGATGGCGT 714394
Query 106641 TCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCT--CC--GC--CTCGTAC 106693
||||| | || | | || |||| ||| || |||| || || |||||||
Sbjct 714393 ACCACAACTTCTGAGCCTTC----ATGGTCTTG---CGACCCTTGCCAAGCTTCTCGTAC 714341
Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753
|| ||| | ||| || |||||||| || ||||| || || || || ||
Sbjct 714340 TTCTCGTATAAGGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGGCCAGGGCACTCGTTG 714281
Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813
|| || | |||| ||| | || || |||||||||||||||||| || || || |||
Sbjct 714280 GGGCACATCAGAGTCCAATCGCCGTTCTTCTCAACCCGCTTCATGAAGAGATCAGGGATC 714221
Query 106814 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 106873
|| |||| | || ||||| | || ||||||| | || ||||| || |
Sbjct 714220 CAAAGGGCTAGGAAAAGATCGCGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGG 714161
Query 106874 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTT 106933
|| |||||||| | || |||||||||||| ||||| || |||| |||| || ||| |
Sbjct 714160 TCCAGGAACTCGAAGACATCCGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCGGT 714101
Query 106934 CG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 106990
|| ||| | || | || || || || ||| ||| || || || ||||| |||
Sbjct 714100 CGCTTGTTGCCACCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATGGGA 714041
Query 106991 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCA 107050
|| | ||| | || ||| || || || ||| ||| | |||| | | |
Sbjct 714040 ATGACACCGTTGGAGGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATACGG 713981
Query 107051 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 107110
|| || | || ||||| |||||| ||| ||||| |||||| | | |||||
Sbjct 713980 TGAGCGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCACACGTCTTGAGAGTG 713921
Query 107111 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 107170
|||||||||| | ||| |||||||| || | | |||||||| |||| |||
Sbjct 713920 TCATAGATACCCTCGATGCTATCCTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGG 713861
Query 107171 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GG 107228
|| || |||||||| ||||| ||||| || | || || | ||| | |||| ||
Sbjct 713860 GGCTGAGGGGTACCAGCGTTGAAAAGGGTGGGCGAAGCATGGGTAAAC--AGCTTGCTGG 713803
Query 107229 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCA 107288
|||| || ||| ||||||| |||| |||||||| || || |||||| | | ||
Sbjct 713802 ACATGAGGTTGTAGGTCTCCAGGACACGCTCAATGTCATCGCCCCAGATGCCAACAGACA 713743
Query 107289 CACGCATAAACATGTATTGGGGT 107311
||||||| | ||||| || |||
Sbjct 713742 CACGCATGATCATGTGCTGCGGT 713720
>seq6
Length=1299473
Score = 111 bits (122), Expect = 2e-19
Identities = 313/471 (66%), Gaps = 21/471 (4%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| || || |||||||| |||||||||||||| ||| | ||| ||||| |||||
Sbjct 1188560 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 1188619
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099
||||| || || || ||| || | | | | || | | | || ||
Sbjct 1188620 AAGTCGAAGGGGTTGGTCGACTTGTAGACCTTCTCGTTGCCGAGAGCGACA------AGA 1188673
Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159
|||||||| | || |||||||||||| ||| ||||||||||| |||| ||
Sbjct 1188674 AGACGATCGGCAACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGCAGG 1188733
Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219
|| || || || || || |||| | ||||| || || || || | | ||||
Sbjct 1188734 GCGCAGGGCAGAGCCTCGGTGAGGAACTCCTTCTCGATGGTGACGGCATCAGTGATGATG 1188793
Query 117220 GCGTGGATAGT-TTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276
| | ||| | ||| | ||| | | || | || | || || || |||
Sbjct 1188794 TCTTCGATGATCTTCTTGCTAGCACGACCCTTCAGATGAGAGTGGAGCAGG--CA-GGCG 1188850
Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336
|| || ||| || |||||||| || ||||| || || || |||||| ||||| |||
Sbjct 1188851 AAGTCAGTGTGAAGGCCCTCATCACGAGAAATCAGCTCGTTGGAGAAGGTCAGGCCAGGC 1188910
Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACC 117395
||||| || |||||||| | ||| | || | ||| || | ||| ||||||||||||
Sbjct 1188911 ATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATACC 1188969
Query 117396 CTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT 117446
||| ||| ||||| |||| ||||||| ||| ||||| |||| | ||||
Sbjct 1188970 CTCAACAGCAGCAAAGGCAACCAGGCGCTGGGCAAAGGA-CGAGTCCTTGT 1189019
>seq16
Length=594729
Score = 89.7 bits (98), Expect = 6e-13
Identities = 166/241 (69%), Gaps = 2/241 (1%)
Strand=Plus/Plus
Query 9426 AAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9485
|| || |||||||| | ||||| || ||||||||||| ||||| | || | || |
Sbjct 133972 AAAAGTTCGCGAACTCGCTTGGCTCCAACACCAACAAAGATCTCATCGAACTC-GCTACC 134030
Query 9486 GAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 9544
|||| | || |||||||||| | |||||| || | |||||| || |||||||||||
Sbjct 134031 AGACATGTAGAAGAAGGGGACACCGGCTTCACCAGCGACGGCTCGTGCAAGAAGAGTCTT 134090
Query 9545 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCCAAA 9604
|| || || || || |||| ||| ||||| || | |||||| || ||
Sbjct 134091 TCCAGTTCCAGGAGGGCCAACGAGAAGGACACCCTTGGGCAGCTTGGCACCGAGGTCAGT 134150
Query 9605 GTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTC 9664
| | | || || | ||||||||| || |||| |||| | || || ||||| ||||
Sbjct 134151 GAACTTTTCGGGGTTCTTGAGAAACTCAACAACTTCTTGAAGCTCCTCCTTGGCCTCGTC 134210
Query 9665 A 9665
|
Sbjct 134211 A 134211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589956809905720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |