Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5 428 8e-115 seq6 122 2e-22 >seq5 Length=1316942 Score = 428 bits (474), Expect = 8e-115 Identities = 1165/1756 (66%), Gaps = 82/1756 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| | |||||||||| ||||||||| ||||||||||| ||||| Sbjct 715480 ACAGTGAACTGGATGGGAGCGGCAGCAGCCTGGGTGCGTAGGTAGTACATGCCAGTCTTG 715421 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 || || ||| |||||| | |||||| |||| | | ||| | | || Sbjct 715420 AGACCGAGCTT---CCAGCCAGCAAAGTGCAT-GCTGGTAAT--CTTACCCATGGTAG-- 715369 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729 |||| | | |||| | ||| |||||||| ||| || ||||| | | Sbjct 715368 -GGTCCTTCATGTGG---------ATGTTGAGGGACTGGGACTGATCAATGAAGGCACCT 715319 Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789 | ||| || | ||| | |||| | | |||||| | ||||||||| |||||| | | Sbjct 715318 CGGTCGGCAGACATCTGGATGACTTGACGCTGGGAAATCTCCCACACAGTCTTGTACAGA 715259 Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC--CCTGTGTA-TGGTC 212846 |||| || | || | | |||||||| ||| | || || ||| | | || | Sbjct 715258 GACTTGATATCAGCGGGAATGTTGGGGATGTCCTGGATGGAACCACCCTCGGCAATGATT 715199 Query 212847 AGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGA 212906 | | | |||| | || ||| | |||| | | ||| ||||| || Sbjct 715198 CGGTTCTT---CATGGCATCAGACCACAAGCCCATATCGACTAGGTCCTTGAGGAGCCAG 715142 Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| ||||| | || || | | |||||||| |||||| || ||| Sbjct 715141 GGGTTGACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAAATGTTTGAGGTATAG 715082 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||| | || |||||||| || || ||||| | ||| ||||| || |||||||| || Sbjct 715081 GGCTCAAAGCATTCGTTGTTGCCTAGGATCTGCGAAGTACTGGCCGTAGGCATGGGGGCG 715022 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGC-TCTGCCCAGTC 213085 | || | ||||| | | || ||||| || | || || ||| ||||||| Sbjct 715021 AGGAGCAAGCTGTTGCGAAGGCCATGCTCCTTGACCTGCTCACGGAGAGTCT-CCCAGTC 714963 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 ||| | |||| | |||||||||||||||||||||||| | |||||| Sbjct 714962 CCAAAGGTCAGAGGG---------CTTCACGTTCCACATGTCAAACTGAAGGATGCC--- 714915 Query 213146 GCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGC 213201 |||| |||| ||||| | | |||||||||||| ||||||||||| |||| || Sbjct 714914 -CTCAGAAGCGGGAGAGCCCTTAAAGGTGGAGTAGGGGCCCTGCTCCTTGGCGAGCT-GC 714857 Query 213202 A-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 | ||| || ||||||||||| ||||||||| |||||||||| | |||| |||| Sbjct 714856 ACGGAGGCAGTCAGGGCAGCGTGGTAGATGGTCTCAAATATCTGCTTGTTCAGCTCACGA 714797 Query 213261 GCCTCTGGGGACGTGAAGGGCAT-CATCATGCGTTGGAACACATCAGCCAGCCCCTGGAC 213319 ||||| |||||| ||||||||| | ||| |||| |||| || || |||||||| Sbjct 714796 GCCTCAGGGGACTCGAAGGGCATGCGAAGAGCG-AGGAAGGCATCGGCAAGACCCTGGAC 714738 Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAA 213378 || | ||| ||||||||||| | || ||| ||| |||| ||| | |||||| Sbjct 714737 ACCAACGCCAATGGGTCTGTGGCGCATGTTGCTGTTGCGAGC-CTCAATGACGGGGTAGT 714679 Query 213379 AGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGT 213438 |||| ||||||||||||||| | ||||||| | || | |||||| | | ||| | Sbjct 714678 GGTTGACGTCGATGATCTTGTTCAAGTTGCGGACAACGACCTGGGTGACTTCGTGCAGCT 714619 Query 213439 ACTCGTGATTGAACACGTAGC--CCC----CGTCCTGCACAAACTCAGGCAGGGCGATGC 213492 | ||||| |||||| ||| || | |||||| |||||| || | | Sbjct 714618 TC------TTGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAACGAAGGCAGAGCCAGGG 714565 Query 213493 TGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACA 213552 ||| ||||| || || || ||||| | || | | |||||| |||||||| ||||| | Sbjct 714564 AGGCAAGGTTACAGACAGCGACCTCATCAGGGGCACAGTACTCAATGATCTCAGTGCAGA 714505 Query 213553 GGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA-GAATCC 213611 ||||| || ||||||||||||||||||| ||| ||| ||||| | ||| | ||| Sbjct 714504 GGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGG-TTGCTCTTGCGGTTGCATGCGTCC 714446 Query 213612 TTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGG 213671 ||||| |||||| ||||| |||||||| || | | | || || | ||| | Sbjct 714445 TTGTACAGCATGAAGGGGTTGCCGGTCTCAGTTTGAGCCTCGAGGATGGCGTACCACAAC 714386 Query 213672 TACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC--CTCGTACTGTTCGTAGA 213729 | | ||||| || | || | || || ||| |||||||| ||||| | Sbjct 714385 TTCTGAGCCTT---CATGGTCTTG--CGACCCTTGCCAAGCTTCTCGTACTTCTCGTATA 714331 Query 213730 GCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGA 213789 | | ||| || | ||| || | | || || || || ||| ||||| | Sbjct 714330 AGGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGGCCAGGGCACTCGTTGGGGCACATCA 714271 Query 213790 GGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848 | |||| || ||| || |||| || | || |||||| || || |||| ||| || || Sbjct 714270 GAGTCCAATCGCCGTTCTTCTC-AACCCGCTTCATGAAGAGATCAGGGATCCAAAGGGCT 714212 Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908 ||| || || | || | ||| ||| || ||| |||||||| || || || Sbjct 714211 AGGAAAAGATCGCGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAAC 714152 Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTG 213965 || |||| ||||||||||| ||||| | ||||||||| || || |||| || | ||| Sbjct 714151 TCGAAGACATCCGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCGGTCGCTTGTTG 714092 Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025 || |||||||| || | || ||||||||| || || | ||| | | ||| Sbjct 714091 CCACCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGACACCG 714032 Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCATGG 214083 ||||| |||||||| || || || || ||||| | ||| | | | || | | | Sbjct 714031 TTGGAGGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATACGGTGAGCGTTG 713972 Query 214084 AGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGA 214143 ||| || || || || || ||||||||||||||| || | | | ||| || || Sbjct 713971 AGA--CCGATACCGCCAGCCATCTTGGAGATCATGGCACACGTCTTGAGAGTGTCATAGA 713914 Query 214144 TGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGG 214203 | || | ||||| || || | | || | || ||||||| || ||||||||| | Sbjct 713913 TACCCTCGATGCTATCCTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGGGGCTGAG 713854 Query 214204 ACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCC 214263 | |||| ||||||||| ||||| |||||| | | | |||| | || | ||| Sbjct 713853 GGGTACCAGCGTTGAAAAGGGTGGGCGAAGCATGGGTAAACAGCTTGCTGGACATGAGGT 713794 Query 214264 TGTAGGTCTCCAGGAC 214279 |||||||||||||||| Sbjct 713793 TGTAGGTCTCCAGGAC 713778 >seq6 Length=1299473 Score = 122 bits (134), Expect = 2e-22 Identities = 342/517 (66%), Gaps = 11/517 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 1188556 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 1188615 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || || ||| | || ||| | | || | Sbjct 1188616 CATGAAGTCGAAGGGGTTGGTCGACTTGTAGACCT-TCTCGTTGCCGAGAGCGACAAGAA 1188674 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| || ||| |||| ||||| | ||||||| ||||||||| | |||| Sbjct 1188675 GACGATCGGCAACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGCAGGG 1188734 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||||| ||||| ||||| ||||||||||| || ||||| || | || | Sbjct 1188735 CGCAGGGCAGAGCCTCGGTGAGGAACTCCTTCTCGATGGTGACGGCATCAGTGATGATGT 1188794 Query 48078 GCTTAACGCGGGACTC--TGAGGGTTTGTTGCG-CAGGTGCTTGGCATAGAGCATGCAGG 48134 ||| || | || || | | | ||| || | | ||||| ||||| Sbjct 1188795 -CTT--CGATGATCTTCTTGCTAGCACGACCCTTCAGATGAGAG---TGGAGCAGGCAGG 1188848 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| |||| | ||| || || || || ||| ||||||||||| || |||| Sbjct 1188849 CGAAGTCAGTGTGAAGGCCCTCATCACGAGAAATCAGCTCGTTGGAGAAGGTCAGGCCAG 1188908 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||||| || | || ||||||||||| || | || || | || ||||||||| | Sbjct 1188909 GCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATAC 1188968 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 |||| || || || || || || | || | || || | || |||||| ||||| Sbjct 1188969 CCTCAACAGCAGCAAAGGCAACCAGGCGCTGGGCAAAGGACGAGTCCTTGTCCTGGATCC 1189028 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 | | |||||||| |||||||| |||||| || Sbjct 1189029 ACCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGG 1189065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931494921547520