Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq5 212 7e-50
seq6 111 2e-19
seq16 107 2e-18
>seq5
Length=1316942
Score = 212 bits (234), Expect = 7e-50
Identities = 1044/1637 (64%), Gaps = 45/1637 (3%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| || | | |||||| || || |||||||| ||||
Sbjct 713721 CCGCAGCACATGATCATGCGTGTGTCTGTTGGCATCTGGGGCGATGACATTGAGCGTGTC 713780
Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
||||||| ||| || |||||| |||| | ||| | || || | || ||||| |
Sbjct 713781 CTGGAGACCTACAACCTCATGTCCAGCAAGCT--GTTTACCCATGCTTCGCCCACCCTTT 713838
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|||| |||||||| || || ||| |||| |||||||| | | || |||||||
Sbjct 713839 TCAACGCTGGTACCCCTCAGCCCCAGCTGTCTTCCTGCTTCCTGGTTGACATGAAGGAGG 713898
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
| ||| | |||||||||| ||||| | | |||||| ||||| ||| |||||
Sbjct 713899 ATAGCATCGAGGGTATCTATGACACTCTCAAGACGTGTGCCATGATCTCCAAGATGGCTG 713958
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| ||||| || | || || | | | |||| | ||| ||| || || |
Sbjct 713959 GCGGTATCGGTCTCAACGCTCACCGTATCCGTGCCACTGGCTCTTACATTGCCGGTACCA 714018
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
| ||| || | ||| | ||||| ||||| || || || ||| ||| || || || |
Sbjct 714019 ACGGTACCTCCAACGGTGTCATTCCCATGCTCCGTGTCTTCAACAACACTGCTCGATACG 714078
Query 75570 TAAATCAAGCGGGGCGTC--GCAAG-GGGTCCAT-CGCGGTCTACTTGGAACCATGGCAT 75625
| | || | | ||| | || | |||| | | ||| ||||| | || || |||||
Sbjct 714079 TCGACCAGG-GTGGCAACAAGCGACCGGGTGCTTTCGCCATCTACCTCGAGCCCTGGCAC 714137
Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685
|| ||| || | |||||||| || | || ||||| || | ||||||| ||
Sbjct 714138 GCGGATGTCTTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCC 714197
Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745
| ||||| || | |||| ||||| || || || |||||||||||||||||| ||
Sbjct 714198 CGCGATCTTTTCCTAGCCCTTTGGATCCCTGATCTCTTCATGAAGCGGGTTGAGAAGAAC 714257
Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805
|| | ||| |||| | || || || || || || || ||||| || |||
Sbjct 714258 GGCGATTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTTGCCGACTGCTACGGCGAG 714317
Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG------AGGGTAGAGCCAATGCGACT 75859
||||| || ||| | ||| ||||| || || ||||| | ||| | | |
Sbjct 714318 GAGTTCGAGGCCTTATACGAGAAGTACGAGAAGCTTGGCAAGGGTCG---CAAGACCA-T 714373
Query 75860 GTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918
| | | | | || ||| ||| | || || ||| | | || || ||||| || | ||
Sbjct 714374 GAA---GGCTCAGAAGTTGTGGTACGCCATCCTCGAGGCTCAAACTGAGACCGGCAACCC 714430
Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978
| ||||| |||||||| || || ||| ||||| ||||| ||||| |||| || ||
Sbjct 714431 CTTCATGCTGTACAAGGACGCATGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCAT 714490
Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038
| ||||| || || ||||| || || | |||||| | |||||| |||||
Sbjct 714491 CCGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTGTGCCCCTGATGAGGTCGCTGT 714550
Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGA 76098
|| || | || || | || || || || |||| | | | || | ||
Sbjct 714551 CTGTAACCTTGCCTCCCTGGCTCTGCCTTCGTTTGTCGACTACAACGAGGGCTGCTACGA 714610
Query 76099 TTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGA 76158
| | || || || ||| |||| || | ||| | || | ||| |||| ||
Sbjct 714611 CTTCAAGAAGCTGCACGAAGTCACCCAGGTCGTTGTCCGCAACTTGAACAAGATCATCGA 714670
Query 76159 CAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTAT 76215
| || || ||||| |||| || ||| | || || ||||| |||||||| ||
Sbjct 714671 CGTCAACCACTACCCCGTCATTGAGGCT-CGCAACAGC--AACATGCGCCACAGACCCAT 714727
Query 76216 TGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTC 76275
||| | ||||| || ||||| || |||| || | ||| | || || ||
Sbjct 714728 TGGCGTTGGTGTCCAGGGTCTTGCCGATGCCTTCCTCGCTCTTCGCATGCCCTTCGAGTC 714787
Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGA 76335
||| || ||| |||| | || ||||| ||||| || ||||| |||||
Sbjct 714788 CCCTGAGGCTCGTGAGCTGAACAAGCAGATATTTGAGACCATCTACCACGCTGCCCTGAC 714847
Query 76336 GGCGAGTTGTGAAT-TGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCG 76394
|| ||| | | || | | || || |||| || ||| |||| |||||||
Sbjct 714848 TGCCTCC-GTGCAGCTCGCCAAGGAGCAGGGCCCCTACTCCACCTTTAAGGGCTCTCCCG 714906
Query 76395 CGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG--A 76452
| || | || | ||||||||||| |||||| || ||||| || || | || | |
Sbjct 714907 CTTCTGAGGGCATCCTTCAGTTTGACATGTGG-AACGTGAAGCCCT-CTGACCTTTGGGA 714964
Query 76453 CTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 76512
|||||| |||| || | |||||||| | || ||||| ||||| | | | ||
Sbjct 714965 CTGGGAGACTCTCCGTGAGCAGGTCAAGGAGCATGGCCTTCGCAACAGCTTGCTCCTCGC 715024
Query 76513 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATA 76572
|| ||||| || ||| || | || ||| | || || || ||||||||||| || ||
Sbjct 715025 CCCCATGCCTACGGCCAGTACTTCGCAGATCCTAGGCAACAACGAATGCTTTGAGCCCTA 715084
Query 76573 CACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCA 76632
|| ||||||| |||| | | | ||| || |||||||| ||||||||
Sbjct 715085 TACCTCAAACATTTACCAGCGCCGTGTCCTGGCTGGTGAGTTCCAGGTTGTCAACCCCTG 715144
Query 76633 CCTCGTCAATGACCTCAAGAAGAT-TGGTC-TCTGGTCCAAGGATATGAAGGATCTCATG 76690
||| |||| ||||| || ||| ||| | | ||||| | | |||||| | | ||
Sbjct 715145 GCTCCTCAAGGACCT--AGTCGATATGGGCTTGTGGTCTGATGCCATGAAGAACCGAATC 715202
Query 76691 GTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTC 76750
| | |||||||||||| || | ||| | | || || | |||||||||| |||
Sbjct 715203 ATTGCCGAGGGTGGTTCCATCCAGGACATCCCCAACATTCCCGCTGATATCAAGTCTCTG 715262
Query 76751 TACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATGGCCGCAGATCGT 76807
||| || |||||||| || | || || ||||| | ||| | || || ||
Sbjct 715263 TACAAGACTGTGTGGGAGATTTCCCAGCGTCAA---GTCATCCAGATGTCTGCCGACCGA 715319
Query 76808 GGTCGCTTCATTGATCA 76824
||| ||||||||||||
Sbjct 715320 GGTGCCTTCATTGATCA 715336
>seq6
Length=1299473
Score = 111 bits (122), Expect = 2e-19
Identities = 313/471 (66%), Gaps = 21/471 (4%)
Strand=Plus/Minus
Query 65056 ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTC 65115
|||| | |||| ||||| ||| ||||||| |||| ||||| ||| ||||||||||||
Sbjct 1189019 ACAAGGACTCG-TCCTTTGCCCAGCGCCTGGTTGCCTTTGCTGCTGTTGAGGGTATCTTC 1188961
Query 65116 TTCTCCGGGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174
||| ||| | || ||| | || | ||| | |||||||| || |||||||| |||||
Sbjct 1188960 TTCAGCGGTGCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCT 1188902
Query 65175 ATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGA 65234
|||||| || || || ||||| || |||||||| || ||| || || ||| ||
Sbjct 1188901 GACCTTCTCCAACGAGCTGATTTCTCGTGATGAGGGCCTTCACACTGACTTCGCC-TG-- 1188845
Query 65235 GCTCTTCAAGACTTTGCGTAATAGACCCACTACC--GAA-ACTATCCACGCCATCGTGAA 65291
|| || | || | || | | ||| | ||| | ||| | | |||| | |
Sbjct 1188844 CCTGCTCCACTCTCATCTGAAGGGTCGTGCTAGCAAGAAGATCATCGAAGACATCATCAC 1188785
Query 65292 AGAGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGG 65351
|| || || || ||||| | |||| || || || || || || || ||||
Sbjct 1188784 TGATGCCGTCACCATCGAGAAGGAGTTCCTCACCGAGGCTCTGCCCTGCGCCCTGCTCGG 1188725
Query 65352 TATGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACA 65411
||||||||||| ||| |||||||||||| || | |||||||| ||
Sbjct 1188724 CATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTTGCCGATCGTCTTCT------ 1188671
Query 65412 AGTTGGGGT-GCCACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAA 65465
|| | | | || | | | | || ||| || || || ||||| ||||| ||
Sbjct 1188670 TGTCGCTCTCGGCAACGAGAAGGTCTACAAGTCGACCAACCCCTTCGACTTCATGGAGAA 1188611
Query 65466 CATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
||| ||| | ||| |||||||||||||| |||||||| || || |||||
Sbjct 1188610 CATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 1188560
>seq16
Length=594729
Score = 107 bits (118), Expect = 2e-18
Identities = 349/537 (65%), Gaps = 19/537 (4%)
Strand=Plus/Minus
Query 175186 TTCAGTGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTT 175245
|||| |||||| | || ||||| ||||| || || ||| |||| |||| || |||
Sbjct 134231 TTCAATGATGTCCACGGTTGTGACGAGGCCAAGGAGGAGCTTCAAGAAGTTGTTGAGTTT 134172
Query 175246 CTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTC 175305
|||||| | ||||| | | || ||||||||| | ||| || | |||||||
Sbjct 134171 CTCAAGAACCCCGAAAAGTTCACTGACCTCGGTGCCAAGCTGCCCAAGGGTGTCCTTCTC 134112
Query 175306 GCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAAT 175365
| || || || || |||||||| || || || |||||| |||| |||||| | |
Sbjct 134111 GTTGGCCCTCCTGGAACTGGAAAGACTCTTCTTGCACGAGCCGTCGCTGGTGAAGCCGGT 134052
Query 175366 GTCCCATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCC 175425
||||| ||| || | |||| | || | ||||| ||||||||||| || |||
Sbjct 134051 GTCCCCTTCTTCTACATGTCTGGTAGCGAGTTCGATGAGATCTTTGTTGGTGTTGGAGCC 133992
Query 175426 AAAAGGGTTCGCGATCTCTTTGAAATCGCC-CGCGAAAATCAACCATGTATTGTCTTCAT 175484
|| | |||||||| || || | ||| | ||| || || ||||| |||||
Sbjct 133991 AAGCGAGTTCGCGAACTTTTCGCCGCAGCCAAGTCAAAGTC-TCCGGCGATTGTGTTCAT 133933
Query 175485 TGATGAGATTGATGC----GGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATG 175540
|| || | ||||| ||| |||||| |||| | || | | | | ||| |||
Sbjct 133932 CGACGAACTCGATGCTATTGGT-GGCAAG---CGCAACCCTAGAGAT---CAAGCCCATG 133880
Query 175541 ACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGA 175600
| || |||||| | || ||||| |||||||| | ||||| || || | ||||
Sbjct 133879 CCAAG------CAAACACTCAACCAACTGCTCACCGAACTCGATGGATTCGATCAAGAGA 133826
Query 175601 CTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTC 175660
| ||| | | |||| ||||| || | | || ||||| | || ||| |||
Sbjct 133825 CCAAGATTATCATCATTGGAGCCACCAACCTTCCCAAGATGCTTGACAAGGCACTCATTC 133766
Query 175661 GCCCGGGTCGTTTTGATCGCAAGATCCAAGTGGGTCTTCCAAGTGTGCGAGGTCGCA 175717
| || || || || || ||| | || | |||| ||| || ||| || || ||||
Sbjct 133765 GACCCGGACGCTTCGACCGCCATGTCAATGTGGATCTACCCGATGTTCGTGGCCGCA 133709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596545341988640
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